Evidence map›Paper›PMID 25953103›Full record

ArticlePlant physiology2015

Transcription Factor ATAF1 in Arabidopsis Promotes Senescence by Direct Regulation of Key Chloroplast Maintenance and Senescence Transcriptional Cascades.

Prashanth Garapati, Gang-Ping Xue, Sergi Munné-Bosch, Salma Balazadeh

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 107 papers.

0numbers the graph read from it
0cells of the map it votes in
107citing papers in PubMed
35.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

107 citing papers in PubMed, 215 citations in OpenAlex.

  1. Review
  2. Article
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  5. Article
  6. Regulatory Network of Leaf Senescence inInternational journal of molecular sciences · 2026
    Review
  7. Article
  8. Identification of a new male sterile gene BrATAF1 of Chinese cabbage.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  9. Article
  10. The NAC Transcription FactorsInternational journal of molecular sciences · 2025
    Article
  11. Article
  12. Article
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  14. Article
  15. Article
  16. Article
  17. Identification of a Novel GeneInternational journal of molecular sciences · 2024
    Article
  18. Article
  19. Article
  20. Article

47 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 3 countries.

Prashanth GarapatiUniversity of Potsdam, Institute of Biochemistry and Biology, 14476 Potsdam-Golm, Germany (P.G., S.B.);Plant Signaling Group, Max Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany (P.G., S.B.);Commonwealth Scientific and Industrial Research Organization Plant Industry, St. Lucia, Queensland 4067, Australia (G.-P.X.); andDepartament de Biologia Vegetal, Universitat de Barcelona, Facultat de Biologia, 08028 Barcelona, Spain (S.M.-B.).
Gang-Ping XueUniversity of Potsdam, Institute of Biochemistry and Biology, 14476 Potsdam-Golm, Germany (P.G., S.B.);Plant Signaling Group, Max Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany (P.G., S.B.);Commonwealth Scientific and Industrial Research Organization Plant Industry, St. Lucia, Queensland 4067, Australia (G.-P.X.); andDepartament de Biologia Vegetal, Universitat de Barcelona, Facultat de Biologia, 08028 Barcelona, Spain (S.M.-B.).
Sergi Munné-BoschUniversity of Potsdam, Institute of Biochemistry and Biology, 14476 Potsdam-Golm, Germany (P.G., S.B.);Plant Signaling Group, Max Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany (P.G., S.B.);Commonwealth Scientific and Industrial Research Organization Plant Industry, St. Lucia, Queensland 4067, Australia (G.-P.X.); andDepartament de Biologia Vegetal, Universitat de Barcelona, Facultat de Biologia, 08028 Barcelona, Spain (S.M.-B.).ORCID http://orcid.org/0000-0001-6523-6848
Salma BalazadehUniversity of Potsdam, Institute of Biochemistry and Biology, 14476 Potsdam-Golm, Germany (P.G., S.B.);Plant Signaling Group, Max Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany (P.G., S.B.);Commonwealth Scientific and Industrial Research Organization Plant Industry, St. Lucia, Queensland 4067, Australia (G.-P.X.); andDepartament de Biologia Vegetal, Universitat de Barcelona, Facultat de Biologia, 08028 Barcelona, Spain (S.M.-B.) balazadeh@mpimp-golm.mpg.de.ORCID http://orcid.org/0000-0002-5789-4071
Max Planck Institute of Molecular Plant Physiology · DEUniversity of Potsdam · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Senescence represents a fundamental process of late leaf development. Transcription factors (TFs) play an important role for expression reprogramming during senescence; however, the gene regulatory networks through which they exert their functions, and their physiological integration, are still largely unknown. Here, we identify the Arabidopsis (Arabidopsis thaliana) abscisic acid (ABA)- and hydrogen peroxide-activated TF Arabidopsis thaliana activating factor1 (ATAF1) as a novel upstream regulator of senescence. ATAF1 executes its physiological role by affecting both key chloroplast maintenance and senescence-promoting TFs, namely GOLDEN2-LIKE1 (GLK1) and ORESARA1 (Arabidopsis NAC092), respectively. Notably, while ATAF1 activates ORESARA1, it represses GLK1 expression by directly binding to their promoters, thereby generating a transcriptional output that shifts the physiological balance toward the progression of senescence. We furthermore demonstrate a key role of ATAF1 for ABA- and hydrogen peroxide-induced senescence, in accordance with a direct regulatory effect on ABA homeostasis genes, including nine-CIS-epoxycarotenoid dioxygenase3 involved in ABA biosynthesis and ABC transporter G family member40, encoding an ABA transport protein. Thus, ATAF1 serves as a core transcriptional activator of senescence by coupling stress-related signaling with photosynthesis- and senescence-related transcriptional cascades.

Indexed as

Abscisic AcidArabidopsisArabidopsis ProteinsChloroplastsDarknessGene Expression Regulation, PlantGenes, PlantHomeostasisHydrogen PeroxideModels, BiologicalPlant LeavesPlants, Genetically ModifiedRepressor ProteinsStress, PhysiologicalAbscisic AcidArabidopsis ProteinsATAF1 protein, ArabidopsisHydrogen PeroxideRepressor Proteins

Identifiers

PMID25953103
PMCPMC4741325
OpenAlexW1770169669

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.