Evidence map›Paper›PMID 25950965›Full record

ArticleMethods in enzymology2015

Biophysical Approaches to the Study of LeuT, a Prokaryotic Homolog of Neurotransmitter Sodium Symporters.

Satinder K Singh, Aritra Pal

Open access · greenAbstract read
In one paragraph

Article in Methods in enzymology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
5.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Conformational dynamics of a neurotransmitter:sodium symporter in a lipid bilayer.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Satinder K SinghDepartment of Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, Connecticut, USA. Electronic address: satinder.k.singh@yale.edu.
Aritra PalDepartment of Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, Connecticut, USA.
Yale University · US

Funding

Structure and Function of a Serotonin TransporterR01MH100688 · NIMH · YALE UNIVERSITY · PI SINGH, SATINDER KAUR · 2014 to 2018
$2.9M
Transport and Inhibition in a Biogenic Amine TransporterR00MH083050 · NIMH · YALE UNIVERSITY · PI SINGH, SATINDER KAUR · 2010 to 2012
$736k
Structural Studies of Vesicular Monoamine TransportersR21MH098180 · NIMH · YALE UNIVERSITY · PI SINGH, SATINDER KAUR · 2012 to 2013
$432k
NIMH NIH HHS R00 MH083050NIMH NIH HHS R00MH083050NIMH NIH HHS R01 MH100688NIMH NIH HHS R01MH100688NIMH NIH HHS R21 MH098180NIMH NIH HHS R21MH098180
6 · The paper itself

Abstract

Ion-coupled secondary transport is utilized by multiple integral membrane proteins as a means of achieving the thermodynamically unfavorable translocation of solute molecules across the lipid bilayer. The chemical nature of these molecules is diverse and includes sugars, amino acids, neurotransmitters, and other ions. LeuT is a sodium-coupled, nonpolar amino acid symporter and eubacterial member of the solute carrier 6 (SLC6) family of Na(+)/Cl(-)-dependent neurotransmitter transporters. Eukaryotic counterparts encompass the clinically and pharmacologically significant transporters for γ-aminobutyric acid (GABA), glycine, serotonin (5-hydroxytryptamine, 5-HT), dopamine (DA), and norepinephrine (NE). Since the crystal structure of LeuT was first solved in 2005, subsequent crystallographic, binding, flux, and spectroscopic studies, complemented with homology modeling and molecular dynamic simulations, have allowed this protein to emerge as a remarkable mechanistic paradigm for both the SLC6 class as well as several other sequence-unrelated SLCs whose members possess astonishingly similar architectures. Despite yielding groundbreaking conceptual advances, this vast treasure trove of data has also been the source of contentious hypotheses. This chapter will present a historical scientific overview of SLC6s; recount how the initial and subsequent LeuT structures were solved, describing the insights they each provided; detail the accompanying functional techniques, emphasizing how they either supported or refuted the static crystallographic data; and assemble these individual findings into a mechanism of transport and inhibition.

Indexed as

BacteriaBacterial ProteinsComputational BiologyCrystallizationElectron Spin Resonance SpectroscopyFluorescence Resonance Energy TransferModels, MolecularPlasma Membrane Neurotransmitter Transport ProteinsProtein ConformationBacterial ProteinsPlasma Membrane Neurotransmitter Transport ProteinsAlternating accessAntidepressantDetergentElectron paramagnetic resonanceFlux kineticsLipid bilayerMembrane protein crystallographyScintillation proximity assaySingle-molecule fluorescence resonance energy transferSodium-dependent neurotransmitter transporter

Identifiers

PMID25950965
PMCPMC4818570
OpenAlexW2394944284

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.