Evidence map›Paper›PMID 25948544›Full record

ArticleeLife2015

Tarantula toxins use common surfaces for interacting with Kv and ASIC ion channels.

Kanchan Gupta, Maryam Zamanian, Chanhyung Bae, Mirela Milescu, Dmitriy Krepkiy, Drew C Tilley, Jon T Sack, Vladimir Yarov-Yarovoy, Jae Il Kim, Kenton J Swartz

Abstract read
In one paragraph

Article in eLife, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
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  4. AFrontiers in pharmacology · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. The tarantula toxin GxTx detains KThe Journal of general physiology · 2019
    Article
  11. Unlocking the gating mechanism of Kv2.1 using guangxitoxin.The Journal of general physiology · 2019
    Article
  12. Structural basis for antiarrhythmic drug interactions with the human cardiac sodium channel.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Review
  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Kanchan GuptaMolecular Physiology and Biophysics Section, Porter Neuroscience Research Center, National Institutes of Health, Bethesda, United States.
Maryam ZamanianMolecular Physiology and Biophysics Section, Porter Neuroscience Research Center, National Institutes of Health, Bethesda, United States.
Chanhyung BaeMolecular Physiology and Biophysics Section, Porter Neuroscience Research Center, National Institutes of Health, Bethesda, United States.
Mirela MilescuMolecular Physiology and Biophysics Section, Porter Neuroscience Research Center, National Institutes of Health, Bethesda, United States.
Dmitriy KrepkiyMolecular Physiology and Biophysics Section, Porter Neuroscience Research Center, National Institutes of Health, Bethesda, United States.
Drew C TilleyDepartment of Physiology and Membrane Biology, University of California, Davis, Davis, United States.
Jon T SackDepartment of Physiology and Membrane Biology, University of California, Davis, Davis, United States.
Vladimir Yarov-YarovoyDepartment of Physiology and Membrane Biology, University of California, Davis, Davis, United States.
Jae Il KimDepartment of Life Science, Gwangju Institute of Science and Technology, Gwangju, Republic of Korea.
Kenton J SwartzMolecular Physiology and Biophysics Section, Porter Neuroscience Research Center, National Institutes of Health, Bethesda, United States.

Funding

Gating mechanisms and pharmacology of voltage-activated ion channelsZIANS002945 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI SWARTZ, KENTON · 2009 to 2025
$44.2M
Training Program In Basic & Translational Cardiovascular ScienceT32HL086350 · NHLBI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Martin Cadeiras, David A. Liem · 2008 to 2026
$7.1M
Genetically Encoded Reporters of Integrated Neural Activity for Functional Mapping of Neural Circuitry-Administrative SupplementU01NS090581 · NINDS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI TRIMMER, JAMES S · 2014 to 2016
$2.2M
Intramural NIH HHS ZIA NS002945NHLBI NIH HHS NIH T32HL086350NHLBI NIH HHS T32 HL086350NINDS NIH HHS 1U01NS090581NINDS NIH HHS U01 NS090581
6 · The paper itself

Abstract

Tarantula toxins that bind to voltage-sensing domains of voltage-activated ion channels are thought to partition into the membrane and bind to the channel within the bilayer. While no structures of a voltage-sensor toxin bound to a channel have been solved, a structural homolog, psalmotoxin (PcTx1), was recently crystalized in complex with the extracellular domain of an acid sensing ion channel (ASIC). In the present study we use spectroscopic, biophysical and computational approaches to compare membrane interaction properties and channel binding surfaces of PcTx1 with the voltage-sensor toxin guangxitoxin (GxTx-1E). Our results show that both types of tarantula toxins interact with membranes, but that voltage-sensor toxins partition deeper into the bilayer. In addition, our results suggest that tarantula toxins have evolved a similar concave surface for clamping onto α-helices that is effective in aqueous or lipidic physical environments.

Indexed as

Acid Sensing Ion Channel BlockersAcid Sensing Ion ChannelsAmino Acid SequenceAnimalsArthropod ProteinsGene ExpressionIon Channel GatingKineticsMolecular Docking SimulationMolecular Dynamics SimulationMolecular Sequence DataNeurotoxinsOocytesPeptidesProtein BindingProtein Structure, SecondaryAcid Sensing Ion Channel BlockersAcid Sensing Ion ChannelsArthropod ProteinsASIC1 protein, humanGxTX-1E, Plesiophrictus guangxiensisKCNB1 protein, humanNeurotoxinsPcTX1 protein, Psalmopoeus cambridgeiPeptidesRecombinant Fusion ProteinsShab Potassium ChannelsSpider VenomsUnilamellar Liposomesbiophysicsoocytesstructural biologytarantulatoxinsxenopus

Identifiers

PMID25948544
PMCPMC4423116

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.