Evidence map›Paper›PMID 25948248›Full record

ArticleMolecular genetics and genomics : MGG2015

Profiling gene expression in citrus fruit calyx abscission zone (AZ-C) treated with ethylene.

Chunzhen Cheng, Lingyun Zhang, Xuelian Yang, Guangyan Zhong

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular genetics and genomics : MGG, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Chunzhen ChengInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences Guangzhou, Guangdong, 510640, People's Republic of China. ld0532cheng@126.com.
Lingyun ZhangSchool of Geographic and Environmental Sciences, Guizhou Normal University Guizhou, Guiyang, 550001, People's Republic of China.
Xuelian YangCollege of Agriculture, Guizhou University Guiyang, Guizhou, 550025, People's Republic of China.
Guangyan ZhongInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences Guangzhou, Guangdong, 510640, People's Republic of China. gy_zhong@163.com.
Guizhou Normal University · CNGuizhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

On-tree storage and harvesting of mature fruit account for a large proportion of cost in the production of citrus, and a reduction of the cost would not be achieved without a thorough understanding of the mechani sm of the mature fruit abscission. Genome-wide gene expression changes in ethylene-treated fruit calyx abscission zone (AZ-C) of Citrus sinensis cv. Olinda were therefore investigated using a citrus genome array representing up to 33,879 citrus transcripts. In total, 1313 and 1044 differentially regulated genes were identified in AZ-C treated with ethylene for 4 and 24 h, respectively. The results showed that mature citrus fruit abscission commenced with the activation of ethylene signal transduction pathway that led to the activation of ethylene responsive transcription factors and the subsequent transcriptional regulation of a large set of ethylene responsive genes. Significantly down-regulated genes included those of starch/sugar biosynthesis, transportation of water and growth promoting hormone synthesis and signaling, whereas significantly up-regulated genes were those involved in defense, cell wall degradation, and secondary metabolism. Our data unraveled the underlying mechanisms of some known important biochemical events occurring at AZ-C and should provide informative suggestions for future manipulation of the events to achieve a controllable abscission for mature citrus fruit.

Indexed as

Gene Expression ProfilingGenes, PlantCitrusElectron TransportEthylenesFlowersMitochondriaPhotosynthesisPlant Growth RegulatorsethyleneEthylenesPlant Growth RegulatorsAbscissionCalyx abscission zone (AZ-C)EthyleneMature citrus fruitMicroarray

Identifiers

PMID25948248
OpenAlexW215021338

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.