Evidence map›Paper›PMID 25946560›Full record

ArticleACS chemical neuroscience2015

Fluorescent filter-trap assay for amyloid fibril formation kinetics in complex solutions.

Irem Nasir, Sara Linse, Celia Cabaleiro-Lago

Abstract read
In one paragraph

Article in ACS chemical neuroscience, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. A Palette of Fluorescent AInternational journal of molecular sciences · 2022
    Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Irem NasirDepartment of Biochemistry and Structural Biology, Center for Molecular Protein Science, Lund University, P.O. Box 124, SE 221 00, Lund, Sweden.
Sara LinseDepartment of Biochemistry and Structural Biology, Center for Molecular Protein Science, Lund University, P.O. Box 124, SE 221 00, Lund, Sweden.
Celia Cabaleiro-LagoDepartment of Biochemistry and Structural Biology, Center for Molecular Protein Science, Lund University, P.O. Box 124, SE 221 00, Lund, Sweden.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Amyloid fibrils are the most distinct components of the plaques associated with various neurodegenerative diseases. Kinetic studies of amyloid fibril formation shed light on the microscopic mechanisms that underlie this process as well as the contributions of internal and external factors to the interplay between different mechanistic steps. Thioflavin T is a widely used noncovalent fluorescent probe for monitoring amyloid fibril formation; however, it may suffer from limitations due to the unspecific interactions between the dye and the additives. Here, we present the results of a filter-trap assay combined with the detection of fluorescently labeled amyloid β (Aβ) peptide. The filter-trap assay separates formed aggregates based on size, and the fluorescent label attached to Aβ allows for their detection. The times of half completion of the process (t1/2) obtained by the filter-trap assay are comparable to values from the ThT assay. High concentrations of human serum albumin (HSA) and carboxyl-modified polystyrene nanoparticles lead to an elevated ThT signal, masking a possible fibril formation event. The filter-trap assay allows fibril formation to be studied in the presence of those substances and shows that Aβ fibril formation is kinetically inhibited by HSA and that the amount of fibrils formed are reduced. In contrast, nanoparticles exhibit a dual-behavior governed by their concentration.

Indexed as

AmyloidAmyloid beta-PeptidesBenzothiazolesChemistry Techniques, AnalyticalEscherichia coliFluorescent DyesHumansKineticsMicroscopy, Electron, TransmissionNanoparticlesPeptide FragmentsPolystyrenesProtein MultimerizationSerum AlbuminSolutionsThiazolesAmyloidAmyloid beta-Peptidesamyloid beta-protein (1-42)BenzothiazolesFluorescent DyesPeptide FragmentsPolystyrenesSerum AlbuminSolutionsThiazolesthioflavin TaggregationAlzheimer’s diseaseAmyloidfilter-trapkineticssite-specific fluorophore labeling

Identifiers

PMID25946560
PMCPMC4599436

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.