Evidence map›Paper›PMID 25945715›Full record

ArticleActa crystallographica. Section F, Structural biology communications2015

Structure of Plasmodium falciparum orotate phosphoribosyltransferase with autologous inhibitory protein-protein interactions.

Shiva Kumar, Kalyanaraman Krishnamoorthy, Devaraja G Mudeppa, Pradipsinh K Rathod

Open access · hybridAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. In Silico Screening ofBiologics : targets & therapy · 2025
    Article
  3. Review
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Shiva KumarDepartment of Chemistry, University of Washington, Seattle, WA 98195, USA.
Kalyanaraman KrishnamoorthyDepartment of Chemistry, University of Washington, Seattle, WA 98195, USA.
Devaraja G MudeppaDepartment of Chemistry, University of Washington, Seattle, WA 98195, USA.
Pradipsinh K RathodDepartment of Chemistry, University of Washington, Seattle, WA 98195, USA.
University of Washington · US

Funding

Shared TechnologyU19AI089688 · NIAID · UNIVERSITY OF WASHINGTON · PI DURAISINGH, MANOJ T · 2010 to 2023
$22.4M
Malaria Topoisomerase inhibitorsR01AI093380 · NIAID · UNIVERSITY OF WASHINGTON · PI RATHOD, PRADIPSINH K. · 2011 to 2020
$3.4M
Chemical Genomics for Antimalarial TargetsR01AI099280 · NIAID · UNIVERSITY OF WASHINGTON · PI RATHOD, PRADIPSINH K. · 2012 to 2016
$2.5M
NIAID NIH HHS AI093380NIAID NIH HHS AI099280NIAID NIH HHS R01 AI093380NIAID NIH HHS R01 AI099280NIAID NIH HHS U19 AI089688
6 · The paper itself

Abstract

The most severe form of malaria is caused by the obligate parasite Plasmodium falciparum. Orotate phosphoribosyltransferase (OPRTase) is the fifth enzyme in the de novo pyrimidine-synthesis pathway in the parasite, which lacks salvage pathways. Among all of the malaria de novo pyrimidine-biosynthesis enzymes, the structure of P. falciparum OPRTase (PfOPRTase) was the only one unavailable until now. PfOPRTase that could be crystallized was obtained after some low-complexity sequences were removed. Four catalytic dimers were seen in the asymmetic unit (a total of eight polypeptides). In addition to revealing unique amino acids in the PfOPRTase active sites, asymmetric dimers in the larger structure pointed to novel parasite-specific protein-protein interactions that occlude the catalytic active sites. The latter could potentially modulate PfOPRTase activity in parasites and possibly provide new insights for blocking PfOPRTase functions.

Indexed as

Amino Acid SequenceCrystallizationMolecular Sequence DataOrotate PhosphoribosyltransferasePlasmodium falciparumProtein Interaction Domains and MotifsProtein Structure, SecondaryProtein Structure, TertiaryOrotate Phosphoribosyltransferasede novoOMPpeptide inhibitionprodrugsPRPPpyrimidinesalvage

Identifiers

PMID25945715
PMCPMC4427171
OpenAlexW2157053608

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.