Evidence map›Paper›PMID 25945711›Full record

ArticleActa crystallographica. Section F, Structural biology communications2015

Structures of a histidine triad family protein from Entamoeba histolytica bound to sulfate, AMP and GMP.

Donald D Lorimer, Ryan Choi, Ariel Abramov, Stephen Nakazawa Hewitt, Anna S Gardberg, Wesley C Van Voorhis, Bart L Staker, Peter J Myler, Thomas E Edwards

Open access · bronzeAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Response to Errors in Crystal structure of HINT from Helicobacter pylori.Acta crystallographica. Section F, Structural biology communications · 2016
    Article
  2. Crystal structure of HINT from Helicobacter pylori.Acta crystallographica. Section F, Structural biology communications · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Donald D LorimerSeattle Structural Genomics Center for Infectious Disease, USA.
Ryan ChoiSeattle Structural Genomics Center for Infectious Disease, USA.
Ariel AbramovSeattle Structural Genomics Center for Infectious Disease, USA.
Stephen Nakazawa HewittSeattle Structural Genomics Center for Infectious Disease, USA.
Anna S GardbergSeattle Structural Genomics Center for Infectious Disease, USA.
Wesley C Van VoorhisSeattle Structural Genomics Center for Infectious Disease, USA.
Bart L StakerSeattle Structural Genomics Center for Infectious Disease, USA.
Peter J MylerSeattle Structural Genomics Center for Infectious Disease, USA.
Thomas E EdwardsSeattle Structural Genomics Center for Infectious Disease, USA.
Joint Center for Structural Genomics · USBeryllium (United States) · USCenter for Infectious Disease Research · USUniversity of Washington · US

Funding

NIAID NIH HHS HHSN272200700057CNIAID NIH HHS HHSN272201200025CPHS HHS HHSN272200700057CPHS HHS HHSN272201200025C
6 · The paper itself

Abstract

Three structures of the histidine triad family protein from Entamoeba histolytica, the causative agent of amoebic dysentery, were solved at high resolution within the Seattle Structural Genomics Center for Infectious Disease (SSGCID). The structures have sulfate (PDB entry 3oj7), AMP (PDB entry 3omf) or GMP (PDB entry 3oxk) bound in the active site, with sulfate occupying the same space as the α-phosphate of the two nucleotides. The C(α) backbones of the three structures are nearly superimposable, with pairwise r.m.s.d.s ranging from 0.06 to 0.13 Å.

Indexed as

Adenosine MonophosphateAmino Acid SequenceCrystallizationEntamoeba histolyticaGuanosine MonophosphateHydrolasesMolecular Sequence DataProtein BindingProtein Structure, SecondarySulfatesAdenosine MonophosphateGuanosine Monophosphatehistidine triad proteinHydrolasesSulfateshydrolasemetal-binding proteinSeattle Structural Genomics Center for Infectious DiseaseSSGCIDstructural genomics

Identifiers

PMID25945711
PMCPMC4427167
OpenAlexW2072967912

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.