Evidence map›Paper›PMID 25944559›Full record

ArticleBiochimica et biophysica acta2015

Interaction between the NS4B amphipathic helix, AH2, and charged lipid headgroups alters membrane morphology and AH2 oligomeric state--Implications for the Hepatitis C virus life cycle.

Esther L Ashworth Briggs, Rafael G B Gomes, Malaz Elhussein, William Collier, I Stuart Findlow, Syma Khalid, Chris J McCormick, Philip T F Williamson

Abstract read
In one paragraph

Article in Biochimica et biophysica acta, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Esther L Ashworth BriggsCentre for Biological Sciences/Institute for Life Sciences, University of Southampton, Highfield Campus, Southampton SO17 1BJ, UK.
Rafael G B GomesCentre for Biological Sciences/Institute for Life Sciences, University of Southampton, Highfield Campus, Southampton SO17 1BJ, UK; School of Medicine, University of Southampton, Southampton SO16 6YD, UK.
Malaz ElhusseinSchool of Chemistry, University of Southampton, Southampton SO17 1BJ, UK.
William CollierCentre for Biological Sciences/Institute for Life Sciences, University of Southampton, Highfield Campus, Southampton SO17 1BJ, UK.
I Stuart FindlowCentre for Biological Sciences/Institute for Life Sciences, University of Southampton, Highfield Campus, Southampton SO17 1BJ, UK.
Syma KhalidSchool of Chemistry, University of Southampton, Southampton SO17 1BJ, UK.
Chris J McCormickSchool of Medicine, University of Southampton, Southampton SO16 6YD, UK. Electronic address: C.J.McCormick@soton.ac.uk.
Philip T F WilliamsonCentre for Biological Sciences/Institute for Life Sciences, University of Southampton, Highfield Campus, Southampton SO17 1BJ, UK. Electronic address: P.T.Williamson@soton.ac.uk.

Funding

Wellcome Trust 090658/z/09/z
6 · The paper itself

Abstract

The non-structural protein 4B (NS4B) from Hepatitis C virus (HCV) plays a pivotal role in the remodelling of the host cell's membranes, required for the formation of the viral replication complex where genome synthesis occurs. NS4B is an integral membrane protein that possesses a number of domains vital for viral replication. Structural and biophysical studies have revealed that one of these, the second amphipathic N-terminal helix (AH2), plays a key role in these remodelling events. However, there is still limited understanding of the mechanism through which AH2 promotes these changes. Here we report on solid-state NMR and molecular dynamics studies that demonstrate that AH2 promotes the clustering of negatively charged lipids within the bilayer, a process that reduces the strain within the bilayer facilitating the remodelling of the lipid bilayer. Furthermore, the presence of negatively charged lipids within the bilayer appears to promote the disassociation of AH2 oligomers, highlighting a potential role for lipid recruitment in regulating NS protein interactions.

Indexed as

Virus ReplicationCell MembraneHepacivirusLipid BilayersMembrane LipidsMolecular Dynamics SimulationNuclear Magnetic Resonance, BiomolecularProtein ConformationProtein MultimerizationStructure-Activity RelationshipSurface PropertiesViral Nonstructural ProteinsLipid BilayersMembrane LipidsNS4B protein, flavivirusViral Nonstructural ProteinsHepatitis C VirusMembrane biophysicsMembrane remodellingMolecular dynamicsSolid-state NMR

Identifiers

PMID25944559
PMCPMC4768108

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.