Evidence map›Paper›PMID 25944469›Full record

ArticleLeukemia & lymphoma2015

Analysis of class I and II histone deacetylase gene expression in human leukemia.

Hui Yang, Sirisha Maddipoti, Andres Quesada, Zachary Bohannan, Monica Cabrero Calvo, Simona Colla, Yue Wei, Marcos Estecio, William Wierda, Carlos Bueso-Ramos and 1 more

Open access · greenAbstract read
In one paragraph

Article in Leukemia & lymphoma, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. The Therapeutic Strategy of HDAC6 Inhibitors in Lymphoproliferative Disease.International journal of molecular sciences · 2018
    Review
  12. Histone deacetylase inhibitors as cancer therapeutics.Annals of translational medicine · 2016
    Article
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Hui Yanga Department of Leukemia , University of Texas MD Anderson Cancer Center , Houston , TX , USA.
Sirisha Maddipotia Department of Leukemia , University of Texas MD Anderson Cancer Center , Houston , TX , USA.
Andres Quesadaa Department of Leukemia , University of Texas MD Anderson Cancer Center , Houston , TX , USA.
Zachary Bohannana Department of Leukemia , University of Texas MD Anderson Cancer Center , Houston , TX , USA.
Monica Cabrero Calvoa Department of Leukemia , University of Texas MD Anderson Cancer Center , Houston , TX , USA.
Simona Collaa Department of Leukemia , University of Texas MD Anderson Cancer Center , Houston , TX , USA.
Yue Weia Department of Leukemia , University of Texas MD Anderson Cancer Center , Houston , TX , USA.
Marcos Estecioa Department of Leukemia , University of Texas MD Anderson Cancer Center , Houston , TX , USA.
William Wierdaa Department of Leukemia , University of Texas MD Anderson Cancer Center , Houston , TX , USA.
Carlos Bueso-Ramosc Department of Hematopathology , University of Texas MD Anderson Cancer Center , Houston , TX , USA.
Guillermo Garcia-Maneroa Department of Leukemia , University of Texas MD Anderson Cancer Center , Houston , TX , USA.
The University of Texas MD Anderson Cancer Center · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Fabien Delerue · 1985 to 2026
$290.8M
Communication Between Patients and their ProvidersR03CA110791 · NCI · UNIVERSITY OF TEXAS MD ANDERSON CAN CTR · PI PARKER, PATRICIA A · 2004 to 2005
$151k
Suppression of genomic instability by tuning the DNA damage response at telomeresK99CA166729 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI FLYNN, RACHEL L. · 2012 to 2012
$129k
NCI NIH HHS CA016672NCI NIH HHS CA110791NCI NIH HHS K99 CA166729NCI NIH HHS P30 CA016672NCI NIH HHS R03 CA110791
6 · The paper itself

Abstract

Histone deacetylase (HDAC) inhibitors are well-characterized anti-leukemia agents and HDAC gene expression deregulation has been reported in various types of cancers. This study sought to characterize HDAC gene expression patterns in several types of leukemia. To do so, a systematic study was performed of the mRNA expression of all drug-targetable HDACs for which reagents were available. This was done by real-time PCR in 24 leukemia cell lines and 39 leukemia patients, which included AML, MDS and CLL patients, some of whom received HDAC inhibitor treatment. Among the samples analyzed, there was no discernible pattern in HDAC expression. HDAC expression was generally increased in CLL patients, except for HDAC2 and HDAC4. HDAC expression was also generally increased in VPA-treated MOLT4 cells. However, this increased expression was not seen in AML patients treated with vorinostat. In summary, increased HDAC expression was noted in CLL patients in general, but the HDAC expression patterns in myeloid malignancies appear to be heterogeneous, which implies that the role of HDACs in leukemia may be related to global expression or protein function rather than specific expression patterns.

Indexed as

Gene Expression Regulation, LeukemicCell Line, TumorCell ProliferationGene Expression ProfilingHistone Deacetylase InhibitorsHistone DeacetylasesHumansLeukemiaRNA, MessengerHistone Deacetylase InhibitorsHistone DeacetylasesRNA, Messengergene expressionHistonehistone deacetylasehistone deacetylase inhibitorleukemia

Identifiers

PMID25944469
PMCPMC4762655
OpenAlexW1820719155

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.