Evidence map›Paper›PMID 25944100›Full record

ArticleThe Plant cell2015

Autophagic recycling plays a central role in maize nitrogen remobilization.

Faqiang Li, Taijoon Chung, Janice G Pennington, Maria L Federico, Heidi F Kaeppler, Shawn M Kaeppler, Marisa S Otegui, Richard D Vierstra

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 128 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
128citing papers in PubMed, 3 pooled it
14.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

128 citing papers in PubMed, 3 syntheses or guidelines pooled it, 260 citations in OpenAlex.

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  17. Can autophagy enhance crop resilience to environmental stress?Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
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68 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Faqiang LiDepartment of Genetics, University of Wisconsin, Madison, Wisconsin 53706.ORCID http://orcid.org/0000-0003-4018-1988
Taijoon ChungDepartment of Genetics, University of Wisconsin, Madison, Wisconsin 53706.
Janice G PenningtonDepartment of Botany, University of Wisconsin, Madison, Wisconsin 53706.
Maria L FedericoDepartment of Agronomy, University of Wisconsin, Madison, Wisconsin 53706.
Heidi F KaepplerDepartment of Agronomy, University of Wisconsin, Madison, Wisconsin 53706.
Shawn M KaepplerDepartment of Agronomy, University of Wisconsin, Madison, Wisconsin 53706.
Marisa S OteguiDepartment of Botany, University of Wisconsin, Madison, Wisconsin 53706.ORCID http://orcid.org/0000-0003-4699-6950
Richard D VierstraDepartment of Genetics, University of Wisconsin, Madison, Wisconsin 53706 vierstra@wisc.edu.ORCID http://orcid.org/0000-0003-0210-3516
University of Wisconsin–Madison · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Autophagy is a primary route for nutrient recycling in plants by which superfluous or damaged cytoplasmic material and organelles are encapsulated and delivered to the vacuole for breakdown. Central to autophagy is a conjugation pathway that attaches AUTOPHAGY-RELATED8 (ATG8) to phosphatidylethanolamine, which then coats emerging autophagic membranes and helps with cargo recruitment, vesicle enclosure, and subsequent vesicle docking with the tonoplast. A key component in ATG8 function is ATG12, which promotes lipidation upon its attachment to ATG5. Here, we fully defined the maize (Zea mays) ATG system transcriptionally and characterized it genetically through atg12 mutants that block ATG8 modification. atg12 plants have compromised autophagic transport as determined by localization of a YFP-ATG8 reporter and its vacuolar cleavage during nitrogen or fixed-carbon starvation. Phenotypic analyses showed that atg12 plants are phenotypically normal and fertile when grown under nutrient-rich conditions. However, when nitrogen-starved, seedling growth is severely arrested, and as the plants mature, they show enhanced leaf senescence and stunted ear development. Nitrogen partitioning studies revealed that remobilization is impaired in atg12 plants, which significantly decreases seed yield and nitrogen-harvest index. Together, our studies demonstrate that autophagy, while nonessential, becomes critical during nitrogen stress and severely impacts maize productivity under suboptimal field conditions.

Indexed as

AutophagyAmino Acid SequenceBase SequenceGene Expression Regulation, PlantGenes, ReporterMolecular Sequence AnnotationMolecular Sequence DataMutationNitrogenOrgan SpecificityPhenotypePlant LeavesPlants, Genetically ModifiedSeedlingsSeedsSequence Analysis, RNANitrogen

Identifiers

PMID25944100
PMCPMC4456646
OpenAlexW2096920300

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.