Evidence map›Paper›PMID 25943786›Full record

ArticleBlood2015

Evidence of an epigenetic origin for high-risk 1q21 copy number aberrations in multiple myeloma.

Jeffrey R Sawyer, Erming Tian, Christoph J Heuck, Donald J Johann, Joshua Epstein, Charles M Swanson, Janet L Lukacs, Regina Lichti Binz, Marian Johnson, Gael Sammartino and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 47 citations in OpenAlex.

  1. Trial
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. The numerous facets of 1q21Oncology letters · 2024
    Review
  10. Identification ofHaematologica · 2024
    Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Review
  18. Liquid biopsies for multiple myeloma in a time of precision medicine.Journal of molecular medicine (Berlin, Germany) · 2020
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 1 institution in 1 country.

Jeffrey R SawyerDepartment of Pathology and Myeloma Institute for Research and Therapy, University of Arkansas for Medical Sciences, Little Rock, AR.
Erming TianMyeloma Institute for Research and Therapy, University of Arkansas for Medical Sciences, Little Rock, AR.
Christoph J HeuckMyeloma Institute for Research and Therapy, University of Arkansas for Medical Sciences, Little Rock, AR.
Donald J JohannMyeloma Institute for Research and Therapy, University of Arkansas for Medical Sciences, Little Rock, AR.
Joshua EpsteinMyeloma Institute for Research and Therapy, University of Arkansas for Medical Sciences, Little Rock, AR.
Charles M SwansonDepartment of Pathology and.
Janet L LukacsDepartment of Pathology and.
Regina Lichti BinzDepartment of Pathology and.
Marian JohnsonDepartment of Pathology and.
Gael SammartinoDepartment of Pathology and.
Maurizio ZangariMyeloma Institute for Research and Therapy, University of Arkansas for Medical Sciences, Little Rock, AR.
Faith E DaviesMyeloma Institute for Research and Therapy, University of Arkansas for Medical Sciences, Little Rock, AR.
Frits van RheeMyeloma Institute for Research and Therapy, University of Arkansas for Medical Sciences, Little Rock, AR.
Gareth J MorganMyeloma Institute for Research and Therapy, University of Arkansas for Medical Sciences, Little Rock, AR.
Bart BarlogieMyeloma Institute for Research and Therapy, University of Arkansas for Medical Sciences, Little Rock, AR.
University of Arkansas for Medical Sciences · US

Funding

Tumor Cell-Microenvironment Interactions in the Molecular Pathogenesis of MultiplP01CA055819 · NCI · UNIV OF ARKANSAS FOR MED SCIS · PI BELLAMY, WILLIAM T · 1993 to 2013
$49.7M
NCI NIH HHS CA 0055819NCI NIH HHS P01 CA055819
6 · The paper itself

Abstract

Multiple myeloma is a B-cell malignancy stratified in part by cytogenetic abnormalities, including the high-risk copy number aberrations (CNAs) of +1q21 and 17p(-). To investigate the relationship between 1q21 CNAs and DNA hypomethylation of the 1q12 pericentromeric heterochromatin, we treated in vitro peripheral blood cultures of 5 patients with balanced constitutional rearrangements of 1q12 and 5 controls with the hypomethylating agent 5-azacytidine. Using G-banding, fluorescence in situ hybridization, and spectral karyotyping, we identified structural aberrations and copy number gains of 1q21 in the treated cells similar to those found in patients with cytogenetically defined high-risk disease. Aberrations included 1q12 triradials, amplifications of regions juxtaposed to 1q12, and jumping translocations 1q12. Strikingly, all 5 patients with constitutional 1q12 rearrangements showed amplifications on the derivative chromosomes distal to the inverted or translocated 1q12 region, including MYCN in 1 case. At the same time, no amplification of the 1q21 region was found when the 1q12 region was inverted or absent. These findings provide evidence that the hypomethylation of the 1q12 region can potentially amplify any genomic region juxtaposed to it and mimic CNAs found in the bone marrow of patients with high-risk disease.

Indexed as

Gene DosageChromosome AberrationsChromosomes, Human, Pair 1DNA MethylationEpigenesis, GeneticHumansMultiple MyelomaTranslocation, Genetic

Identifiers

PMID25943786
PMCPMC4463736
OpenAlexW1901004393

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.