Evidence map›Paper›PMID 25943387›Full record

ArticleMolecular microbiology2015

Cross-species chimeras reveal BamA POTRA and β-barrel domains must be fine-tuned for efficient OMP insertion.

Douglas F Browning, Vassiliy N Bavro, Jessica L Mason, Yanina R Sevastsyanovich, Amanda E Rossiter, Mark Jeeves, Timothy J Wells, Timothy J Knowles, Adam F Cunningham, James W Donald and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Native β-barrel substrates pass through two shared intermediates during folding on the BAM complex.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Review
  5. Article
  6. Article
  7. The gain-of-function alleleProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Insertion of proteins and lipopolysaccharide into the bacterial outer membrane.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Douglas F BrowningInstitute of Microbiology and Infection, University of Birmingham, Birmingham, B15 2TT, UK.
Vassiliy N BavroInstitute of Microbiology and Infection, University of Birmingham, Birmingham, B15 2TT, UK.
Jessica L MasonInstitute of Microbiology and Infection, University of Birmingham, Birmingham, B15 2TT, UK.
Yanina R SevastsyanovichInstitute of Microbiology and Infection, University of Birmingham, Birmingham, B15 2TT, UK.
Amanda E RossiterInstitute of Microbiology and Infection, University of Birmingham, Birmingham, B15 2TT, UK.
Mark JeevesSchool of Cancer Sciences, University of Birmingham, Birmingham, B15 2TT, UK.
Timothy J WellsInstitute of Microbiology and Infection, University of Birmingham, Birmingham, B15 2TT, UK.
Timothy J KnowlesSchool of Cancer Sciences, University of Birmingham, Birmingham, B15 2TT, UK.
Adam F CunninghamInstitute of Microbiology and Infection, University of Birmingham, Birmingham, B15 2TT, UK.
James W DonaldCollege of Life Sciences, University of Dundee, Dundee, DD1 5EH, UK.
Tracy PalmerCollege of Life Sciences, University of Dundee, Dundee, DD1 5EH, UK.
Michael OverduinSchool of Cancer Sciences, University of Birmingham, Birmingham, B15 2TT, UK.
Ian R HendersonInstitute of Microbiology and Infection, University of Birmingham, Birmingham, B15 2TT, UK.
University of Birmingham · GBUniversity of Dundee · GB

Funding

Medical Research Council MC_PC_13057
6 · The paper itself

Abstract

BAM is a conserved molecular machine, the central component of which is BamA. Orthologues of BamA are found in all Gram-negative bacteria, chloroplasts and mitochondria where it is required for the folding and insertion of β-barrel containing integral outer membrane proteins (OMPs) into the outer membrane. BamA binds unfolded β-barrel precursors via the five polypeptide transport-associated (POTRA) domains at its N-terminus. The C-terminus of BamA folds into a β-barrel domain, which tethers BamA to the outer membrane and is involved in OMP insertion. BamA orthologues are found in all Gram-negative bacteria and appear to function in a species-specific manner. Here we investigate the nature of this species-specificity by examining whether chimeric Escherichia coli BamA fusion proteins, carrying either the β-barrel or POTRA domains from various BamA orthologues, can functionally replace E. coli BamA. We demonstrate that the β-barrel domains of many BamA orthologues are functionally interchangeable. We show that defects in the orthologous POTRA domains can be rescued by compensatory mutations within the β-barrel. These data reveal that the POTRA and barrel domains must be precisely aligned to ensure efficient OMP insertion.

Indexed as

Bacterial Outer Membrane ProteinsChimeraEscherichia coliEscherichia coli ProteinsGram-Negative BacteriaModels, MolecularMolecular Sequence DataProtein ConformationProtein FoldingProtein Structure, SecondaryProtein Structure, TertiaryRecombinant Fusion ProteinsSpecies SpecificityBacterial Outer Membrane ProteinsBamA protein, E coliEscherichia coli ProteinsRecombinant Fusion Proteins

Identifiers

PMID25943387
PMCPMC4950039
OpenAlexW1917547021

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.