ArticlePloS one2015
Genetic Map Construction and Detection of Genetic Loci Underlying Segregation Distortion in an Intraspecific Cross of Populus deltoides.
Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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Who cites it
16 citing papers in PubMed.
- Article
- Genome-Wide SNP Markers Accelerate Perennial Forest Tree Breeding Rate for Disease Resistance through Marker-Assisted and Genome-Wide Selection.International journal of molecular sciences · 2022Review
- Berry Anthocyanin, Acid, and Volatile Trait Analyses in a Grapevine-Interspecific F2 Population Using an Integrated GBS and rhAmpSeq Genetic Map.Plants (Basel, Switzerland) · 2022Article
- Loss of chromatin remodeler DDM1 causes segregation distortion in Arabidopsis thaliana.Planta · 2021Article
- High-Quality SNP Linkage Maps Improved QTL Mapping and Genome Assembly in Populus.The Journal of heredity · 2020Article
- Recurrent breakdown and rebalance of segregation distortion in the genomes: battle for the transmission advantage.aBIOTECH · 2020Review
- Analysis of Crossover Events and Allele Segregation Distortion in Interspecific Citrus Hybrids by Single Pollen Genotyping.Frontiers in plant science · 2020Article
- The first genetic linkage map for Fraxinus pennsylvanica and syntenic relationships with four related species.Plant molecular biology · 2019Article
- High-density genetic map construction and quantitative trait loci identification for growth traits in (Taxodium distichum var. distichum × T. mucronatum) × T. mucronatum.BMC plant biology · 2018Article
- High-throughput genotyping-by-sequencing facilitates molecular tagging of a novel rust resistance gene, RTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018Article
- Genetic linkage map and QTL identification for adventitious rooting traits in red gum eucalypts.3 Biotech · 2018Article
- QTL mapping for haploid male fertility by a segregation distortion method and fine mapping of a key QTL qhmf4 in maize.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017Article
- Comparative High-Density Linkage Mapping Reveals Conserved Genome Structure but Variation in Levels of Heterochiasmy and Location of Recombination Cold Spots in the Common Frog.G3 (Bethesda, Md.) · 2017Article
- A High-Density SNP Genetic Linkage Map and QTL Analysis of Growth-Related Traits in a Hybrid Family of Oysters (Crassostrea gigas × Crassostrea angulata) Using Genotyping-by-Sequencing.G3 (Bethesda, Md.) · 2016Article
- Identification and Characterization of Segregation Distortion Loci on Cotton Chromosome 18.Frontiers in plant science · 2016Article
- Confirmation of Single-Locus Sex Determination and Female Heterogamety in Willow Based on Linkage Analysis.PloS one · 2016Article
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5 authors.
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Abstract
Based on a two-way pseudo-testcross strategy, high density and complete coverage linkage maps were constructed for the maternal and paternal parents of an intraspecific F2 pedigree of Populus deltoides. A total of 1,107 testcross markers were obtained, and the mapping population consisted of 376 progeny. Among these markers, 597 were from the mother, and were assigned into 19 linkage groups, spanning a total genetic distance of 1,940.3 cM. The remaining 519 markers were from the father, and were also were mapped into 19 linkage groups, covering 2,496.3 cM. The genome coverage of both maps was estimated as greater than 99.9% at 20 cM per marker, and the numbers of linkage groups of both maps were in accordance with the 19 haploid chromosomes in Populus. Marker segregation distortion was observed in large contiguous blocks on some of the linkage groups. Subsequently, we mapped the segregation distortion loci in this mapping pedigree. Altogether, eight segregation distortion loci with significant logarithm of odds supports were detected. Segregation distortion indicated the uneven transmission of the alternate alleles from the mapping parents. The corresponding genome regions might contain deleterious genes or be associated with hybridization incompatibility. In addition to the detection of segregation distortion loci, the established genetic maps will serve as a basic resource for mapping genetic loci controlling traits of interest in future studies.
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