Evidence map›Paper›PMID 25941671›Full record

ArticleFrontiers in chemistry2015

Deciphering the photochemical mechanisms describing the UV-induced processes occurring in solvated guanine monophosphate.

Salvatore F Altavilla, Javier Segarra-Martí, Artur Nenov, Irene Conti, Ivan Rivalta, Marco Garavelli

Abstract read
In one paragraph

Article in Frontiers in chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Salvatore F AltavillaDipartimento di Chimica "G. Ciamician," Università di Bologna Bologna, Italy.
Javier Segarra-MartíDipartimento di Chimica "G. Ciamician," Università di Bologna Bologna, Italy.
Artur NenovDipartimento di Chimica "G. Ciamician," Università di Bologna Bologna, Italy.
Irene ContiDipartimento di Chimica "G. Ciamician," Università di Bologna Bologna, Italy.
Ivan RivaltaÉcole Normale Supérieure de Lyon, Centre National de la Recherche Scientifique, UMR 5182, Université de Lyon Lyon, France.
Marco GaravelliDipartimento di Chimica "G. Ciamician," Università di Bologna Bologna, Italy ; École Normale Supérieure de Lyon, Centre National de la Recherche Scientifique, UMR 5182, Université de Lyon Lyon, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The photophysics and photochemistry of water-solvated guanine monophosphate (GMP) are here characterized by means of a multireference quantum-chemical/molecular mechanics theoretical approach (CASPT2//CASSCF/AMBER) in order to elucidate the main photo-processes occurring upon UV-light irradiation. The effect of the solvent and of the phosphate group on the energetics and structural features of this system are evaluated for the first time employing high-level ab initio methods and thoroughly compared to those in vacuo previously reported in the literature and to the experimental evidence to assess to which extent they influence the photoinduced mechanisms. Solvated electronic excitation energies of solvated GMP at the Franck-Condon (FC) region show a red shift for the ππ(*) La and Lb states, whereas the energy of the oxygen lone-pair nπ(*) state is blue-shifted. The main photoinduced decay route is promoted through a ring-puckering motion along the bright lowest-lying La state toward a conical intersection (CI) with the ground state, involving a very shallow stationary point along the minimum energy pathway in contrast to the barrierless profile found in gas-phase, the point being placed at the end of the minimum energy path (MEP) thus endorsing its ultrafast deactivation in accordance with time-resolved transient and photoelectron spectroscopy experiments. The role of the nπ(*) state in the solvated system is severely diminished as the crossings with the initially populated La state and also with the Lb state are placed too high energetically to partake prominently in the deactivation photo-process. The proposed mechanism present in solvated and in vacuo DNA/RNA chromophores validates the intrinsic photostability mechanism through CI-mediated non-radiative processes accompanying the bright excited-state population toward the ground state and subsequent relaxation back to the FC region.

Indexed as

CASSCF/CASPT2DNAGMPguaninephotochemistryphotostabilitypurineQM/MM

Identifiers

PMID25941671
PMCPMC4403598

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.