Evidence map›Paper›PMID 25941405›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Cytoplasmic dynein regulates its attachment to microtubules via nucleotide state-switched mechanosensing at multiple AAA domains.

Matthew P Nicholas, Florian Berger, Lu Rao, Sibylle Brenner, Carol Cho, Arne Gennerich

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 125 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. The mechanochemical cycle of reactive full-length human dynein 1.Nature structural & molecular biology · 2025
    Article
  5. Article
  6. Review
  7. MINFLUX reveals dynein stepping in live neurons.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Article
  9. Article
  10. Review
  11. Kindlin stabilizes the talin·integrin bond under mechanical load by generating an ideal bond.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Matthew P NicholasDepartment of Anatomy and Structural Biology, Gruss Lipper Biophotonics Center, and Medical Scientist Training Program, Albert Einstein College of Medicine, Bronx, NY 10461;
Florian BergerTheory and Bio-Systems, Max Planck Institute of Colloids and Interfaces, 14424 Potsdam, Germany; Laboratory of Sensory Neuroscience, and Howard Hughes Medical Institute, Rockefeller University, New York, NY 10065; and.
Lu RaoDepartment of Anatomy and Structural Biology, Gruss Lipper Biophotonics Center, and.
Sibylle BrennerDepartment of Anatomy and Structural Biology, Gruss Lipper Biophotonics Center, and.
Carol ChoDepartment of Biochemistry, Stanford University School of Medicine, Stanford, CA 94305.
Arne GennerichDepartment of Anatomy and Structural Biology, Gruss Lipper Biophotonics Center, and arne.gennerich@einstein.yu.edu.
Albert Einstein College of Medicine · USMax Planck Society · DEStanford University · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007288 · NIGMS · YESHIVA UNIVERSITY · PI AKABAS, MYLES H. · 1985 to 2022
$35.6M
Special Animal CoreP30DK041296 · NIDDK · YESHIVA UNIVERSITY · PI WOLKOFF, ALLAN W · 1989 to 2018
$22.9M
MOLECULAR MECHANISM OF THE CYTOPLASMIC DYNEIN-DYNACTIN MOTOR COMPLEXR01GM098469 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI GENNERICH, ARNE · 2012 to 2025
$5.1M
MOLECULAR BIOPHYSICS TRAINING GRANTT32GM008572 · NIGMS · YESHIVA UNIVERSITY · PI BRENOWITZ, MICHAEL D. · 1995 to 2009
$3.0M
Howard Hughes Medical InstituteNIDDK NIH HHS P30 DK041296NIGMS NIH HHS R01 GM098469NIGMS NIH HHS R01GM098469NIGMS NIH HHS T32 GM007288NIGMS NIH HHS T32GM007288NIGMS NIH HHS T32 GM008572NIGMS NIH HHS T32GM008572
6 · The paper itself

Abstract

Cytoplasmic dynein is a homodimeric microtubule (MT) motor protein responsible for most MT minus-end-directed motility. Dynein contains four AAA+ ATPases (AAA: ATPase associated with various cellular activities) per motor domain (AAA1-4). The main site of ATP hydrolysis, AAA1, is the only site considered by most dynein motility models. However, it remains unclear how ATPase activity and MT binding are coordinated within and between dynein's motor domains. Using optical tweezers, we characterize the MT-binding strength of recombinant dynein monomers as a function of mechanical tension and nucleotide state. Dynein responds anisotropically to tension, binding tighter to MTs when pulled toward the MT plus end. We provide evidence that this behavior results from an asymmetrical bond that acts as a slip bond under forward tension and a slip-ideal bond under backward tension. ATP weakens MT binding and reduces bond strength anisotropy, and unexpectedly, so does ADP. Using nucleotide binding and hydrolysis mutants, we show that, although ATP exerts its effects via binding AAA1, ADP effects are mediated by AAA3. Finally, we demonstrate "gating" of AAA1 function by AAA3. When tension is absent or applied via dynein's C terminus, ATP binding to AAA1 induces MT release only if AAA3 is in the posthydrolysis state. However, when tension is applied to the linker, ATP binding to AAA3 is sufficient to "open" the gate. These results elucidate the mechanisms of dynein-MT interactions, identify regulatory roles for AAA3, and help define the interplay between mechanical tension and nucleotide state in regulating dynein motility.

Indexed as

AcetyltransferasesAnisotropyBiomechanical PhenomenaCytoplasmDNA PrimersDyneinsGreen Fluorescent ProteinsMechanotransduction, CellularMicrotubulesMutagenesisOptical TweezersProtein BindingSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAcetyltransferasesDNA PrimersDyneinsGreen Fluorescent ProteinsNAT1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsAAA+ ATPasescytoplasmic dyneinmechanosensingmicrotubulesoptical tweezers

Identifiers

PMID25941405
PMCPMC4443381
OpenAlexW2121343282

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.