Evidence map›Paper›PMID 25941368›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

The phototransduction machinery in the rod outer segment has a strong efficacy gradient.

Monica Mazzolini, Giuseppe Facchetti, Laura Andolfi, Remo Proietti Zaccaria, Salvatore Tuccio, Johannes Treu, Claudio Altafini, Enzo M Di Fabrizio, Marco Lazzarino, Gert Rapp and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.0field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 29 citations in OpenAlex.

  1. Peeling tape produces strong electric fields via stick-slip friction that drive chemical reactions.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Supramolecular organization of rhodopsin in rod photoreceptor cell membranes.Pflugers Archiv : European journal of physiology · 2021
    Review
  8. Calcium flares and compartmentalization in rod photoreceptors.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  9. Review
  10. Article
  11. Rhodopsin Oligomerization and Aggregation.The Journal of membrane biology · 2019
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Molecular basis for photoreceptor outer segment architecture.Progress in retinal and eye research · 2016
    Review
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Monica MazzoliniInternational School for Advanced Studies, 34136 Trieste, Italy; Cluster in Biomedicine S.c.r.l., 34149 Trieste, Italy;
Giuseppe FacchettiInternational School for Advanced Studies, 34136 Trieste, Italy;
Laura AndolfiCluster in Biomedicine S.c.r.l., 34149 Trieste, Italy;
Remo Proietti ZaccariaIstituto Italiano di Tecnologia, 16163 Genova, Italy;
Salvatore TuccioIstituto Italiano di Tecnologia, 16163 Genova, Italy;
Johannes TreuRapp OptoElectronic, 22880 Wedel, Germany;
Claudio AltafiniInternational School for Advanced Studies, 34136 Trieste, Italy;
Enzo M Di FabrizioKing Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia; Bio-Nanotechnology and Engineering for Medicine, Department of Experimental and Clinical Medicine, University of Magna Graecia, 88100 Catanzaro, Italy; and.
Marco LazzarinoCluster in Biomedicine S.c.r.l., 34149 Trieste, Italy; Istituto Officina dei Materiali - Consiglio Nazionale delle Ricerche, 34149 Trieste, Italy.
Gert RappRapp OptoElectronic, 22880 Wedel, Germany;
Vincent TorreInternational School for Advanced Studies, 34136 Trieste, Italy; torre@sissa.it.
Scuola Internazionale Superiore di Studi Avanzati · ITCluster in Biomedicine · ITItalian Institute of Technology · ITIstituto Officina dei Materiali · ITKing Abdullah University of Science and Technology · SA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rod photoreceptors consist of an outer segment (OS) and an inner segment. Inside the OS a biochemical machinery transforms the rhodopsin photoisomerization into electrical signal. This machinery has been treated as and is thought to be homogenous with marginal inhomogeneities. To verify this assumption, we developed a methodology based on special tapered optical fibers (TOFs) to deliver highly localized light stimulations. By using these TOFs, specific regions of the rod OS could be stimulated with spots of light highly confined in space. As the TOF is moved from the OS base toward its tip, the amplitude of saturating and single photon responses decreases, demonstrating that the efficacy of the transduction machinery is not uniform and is 5-10 times higher at the base than at the tip. This gradient of efficacy of the transduction machinery is attributed to a progressive depletion of the phosphodiesterase along the rod OS. Moreover we demonstrate that, using restricted spots of light, the duration of the photoresponse along the OS does not increase linearly with the light intensity as with diffuse light.

Indexed as

Models, NeurologicalAnimalsComputer SimulationLasersMalePatch-Clamp TechniquesPhosphoric Diester HydrolasesPhotic StimulationRod Cell Outer SegmentVision, OcularXenopus laevisPhosphoric Diester HydrolasescGMP diffusionoptical fiberphosphodiesterasephototransductionrhodopsin

Identifiers

PMID25941368
PMCPMC4443333
OpenAlexW1624087405

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.