Evidence map›Paper›PMID 25940718›Full record

ArticleJournal of clinical oncology : official journal of the American Society of Clinical Oncology2015

Next-Generation Sequencing Panels for the Diagnosis of Colorectal Cancer and Polyposis Syndromes: A Cost-Effectiveness Analysis.

Carlos J Gallego, Brian H Shirts, Caroline S Bennette, Greg Guzauskas, Laura M Amendola, Martha Horike-Pyne, Fuki M Hisama, Colin C Pritchard, William M Grady, Wylie Burke and 2 more

Abstract read
In one paragraph

Article in Journal of clinical oncology : official journal of the American Society of Clinical Oncology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. A systematic review of the methodological quality of economic evaluations in genetic screening and testing for monogenic disorders.Genetics in medicine : official journal of the American College of Medical Genetics · 2022
    Pooled it
  2. Guideline
  3. Which Lynch syndrome screening programs could be implemented in the "real world"? A systematic review of economic evaluations.Genetics in medicine : official journal of the American College of Medical Genetics · 2018
    Pooled it
  4. Trial
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Block, Blood, or Both? Outcomes, Opportunities, and Barriers in Colorectal Cancer Universal Testing.Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association · 2022
    Article
  13. Racial and Ethnic Disparities in Germline Genetic Testing of Patients With Young-Onset Colorectal Cancer.Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association · 2022
    Article
  14. Article
  15. Review
  16. Cost-Effectiveness of Colorectal Cancer Genetic Testing.International journal of environmental research and public health · 2021
    Article
  17. Article
  18. The role of genomics in global cancer prevention.Nature reviews. Clinical oncology · 2021
    Review
  19. Article
  20. Genomic profiling in oncology clinical practice.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2020
    Review

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Carlos J GallegoAll authors: University of Washington, Seattle, WA.
Brian H ShirtsAll authors: University of Washington, Seattle, WA.
Caroline S BennetteAll authors: University of Washington, Seattle, WA.
Greg GuzauskasAll authors: University of Washington, Seattle, WA.
Laura M AmendolaAll authors: University of Washington, Seattle, WA.
Martha Horike-PyneAll authors: University of Washington, Seattle, WA.
Fuki M HisamaAll authors: University of Washington, Seattle, WA.
Colin C PritchardAll authors: University of Washington, Seattle, WA.
William M GradyAll authors: University of Washington, Seattle, WA.
Wylie BurkeAll authors: University of Washington, Seattle, WA.
Gail P JarvikAll authors: University of Washington, Seattle, WA.
David L VeenstraAll authors: University of Washington, Seattle, WA. veenstra@uw.edu.

Funding

Clinical sequencing in cancer: Clinical ethical and technological studiesU01HG006507 · NHGRI · UNIVERSITY OF WASHINGTON · PI JARVIK, GAIL PAIRITZ · 2012 to 2016
$10.6M
Medical Genetics Training GrantT32GM007454 · NIGMS · UNIVERSITY OF WASHINGTON · PI Gail Pairitz Jarvik, Andrew Ben Stergachis · 1985 to 2026
$6.9M
CSER RoRC Centralized Support Coordinating CenterU01HG007307 · NHGRI · UNIVERSITY OF WASHINGTON · PI BURKE, WYLIE G., JARVIK, GAIL PAIRITZ · 2013 to 2016
$3.6M
Personalized Medicine Economics Research PriMERU01AG047109 · NIA · UNIVERSITY OF WASHINGTON · PI VEENSTRA, DAVID L · 2013 to 2017
$2.2M
UW Patient-Centered Outcomes Research Career Development Program (K12)K12HS021686 · AHRQ · UNIVERSITY OF WASHINGTON · PI SULLIVAN, SEAN D · 2012 to 2013
$902k
AHRQ HHS K12 HS021686AHRQ HHS K12HS021686NHGRI NIH HHS U01HG0006507NHGRI NIH HHS U01 HG006507NHGRI NIH HHS U01 HG007307NHGRI NIH HHS U01HG007307NIA NIH HHS U01 AG047109NIA NIH HHS U01AG047109NIGMS NIH HHS T32 GM007454
6 · The paper itself

Abstract

purposeTo evaluate the cost effectiveness of next-generation sequencing (NGS) panels for the diagnosis of colorectal cancer and polyposis (CRCP) syndromes in patients referred to cancer genetics clinics. PATIENTS AND

methodsWe developed a decision model to evaluate NGS panel testing compared with current standard of care in patients referred to a cancer genetics clinic. We obtained data on the prevalence of genetic variants from a large academic laboratory and calculated the costs and health benefits of identifying relatives with a pathogenic variant, in life-years and quality-adjusted life-years (QALYs). We classified the CRCP syndromes according to their type of inheritance and penetrance of colorectal cancer. One-way and probabilistic sensitivity analyses were conducted to assess uncertainty.

resultsEvaluation with an NGS panel that included Lynch syndrome genes and other genes associated with highly penetrant CRCP syndromes led to an average increase of 0.151 year of life, 0.128 QALY, and $4,650 per patient, resulting in an incremental cost-effectiveness ratio of $36,500 per QALY compared with standard care and a 99% probability that this panel was cost effective at a threshold of $100,000 per QALY. When compared with this panel, the addition of genes with low colorectal cancer penetrance resulted in an incremental cost-effectiveness ratio of $77,300 per QALY.

conclusionThe use of an NGS panel that includes genes associated with highly penetrant CRCP syndromes in addition to Lynch syndrome genes as a first-line test is likely to provide meaningful clinical benefits in a cost-effective manner at a $100,000 per QALY threshold.

Indexed as

Adenomatous Polyposis ColiColorectal NeoplasmsColorectal Neoplasms, Hereditary NonpolyposisCost-Benefit AnalysisDecision Support TechniquesGenetic TestingHealth Care CostsHigh-Throughput Nucleotide SequencingHumansImmunohistochemistryModels, EconomicMutationPhenotypeProbabilityQuality-Adjusted Life Years

Identifiers

PMID25940718
PMCPMC4461806

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.