Evidence map›Paper›PMID 25939505›Full record

ArticleInfection and immunity2015

Mutational Analysis of the Chlamydia muridarum Plasticity Zone.

Krithika Rajaram, Amanda M Giebel, Evelyn Toh, Shuai Hu, Jasmine H Newman, Sandra G Morrison, Laszlo Kari, Richard P Morrison, David E Nelson

Open access · bronzeAbstract read
In one paragraph

Article in Infection and immunity, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 55 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Krithika RajaramDepartment of Biology, Indiana University, Bloomington, Indiana, USA.
Amanda M GiebelDepartment of Biology, Indiana University, Bloomington, Indiana, USA.
Evelyn TohDepartment of Microbiology and Immunology, Indiana University School of Medicine, Indianapolis, Indiana, USA.
Shuai HuDepartment of Microbiology and Immunology, Indiana University School of Medicine, Indianapolis, Indiana, USA.
Jasmine H NewmanDepartment of Biochemistry and Molecular Biology, Indiana University, Bloomington, Indiana, USA.
Sandra G MorrisonDepartment of Microbiology and Immunology, University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA.
Laszlo KariLaboratory of Intracellular Parasites, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, Montana, USA.
Richard P MorrisonDepartment of Microbiology and Immunology, University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA.ORCID http://orcid.org/0000-0002-9747-9884
David E NelsonDepartment of Microbiology and Immunology, Indiana University School of Medicine, Indianapolis, Indiana, USA nelsonde@indiana.edu.
Indiana University Bloomington · USIndiana University School of MedicineUniversity of Arkansas for Medical Sciences · USNational Institutes of Health · US

Funding

Study of the Cell-specific Inflammasome Responses During Defense Against Gram-negative BacteriaP20GM103625 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI SMELTZER, MARK S · 2012 to 2021
$21.5M
Genetic analysis of mechanisms of chlamydial immune evasionR01AI099278 · NIAID · INDIANA UNIVERSITY INDIANAPOLIS · PI NELSON, DAVID EMMET · 2012 to 2023
$4.6M
Genetic analysis of mechanisms of chlamydial immune evasionR56AI099278 · NIAID · INDIANA UNIVERSITY INDIANAPOLIS · PI NELSON, DAVID EMMET · 2017 to 2017
$579k
Six new Chlamydia epitopesR21AI099307 · NIAID · INDIANA UNIVERSITY INDIANAPOLIS · PI JOHNSON, RAYMOND MORRIS, NELSON, DAVID EMMET · 2012 to 2013
$428k
NIAID NIH HHS R01 AI099278NIAID NIH HHS R01AI099278NIAID NIH HHS R21 AI099307NIAID NIH HHS R21AI099307NIAID NIH HHS R56 AI099278NIGMS NIH HHS 1P20GM103625NIGMS NIH HHS P20 GM103625
6 · The paper itself

Abstract

Pathogenically diverse Chlamydia spp. can have surprisingly similar genomes. Chlamydia trachomatis isolates that cause trachoma, sexually transmitted genital tract infections (chlamydia), and invasive lymphogranuloma venereum (LGV) and the murine strain Chlamydia muridarum share 99% of their gene content. A region of high genomic diversity between Chlamydia spp. termed the plasticity zone (PZ) may encode niche-specific virulence determinants that dictate pathogenic diversity. We hypothesized that PZ genes might mediate the greater virulence and gamma interferon (IFN-γ) resistance of C. muridarum compared to C. trachomatis in the murine genital tract. To test this hypothesis, we isolated and characterized a series of C. muridarum PZ nonsense mutants. Strains with nonsense mutations in chlamydial cytotoxins, guaBA-add, and a phospholipase D homolog developed normally in cell culture. Two of the cytotoxin mutants were less cytotoxic than the wild type, suggesting that the cytotoxins may be functional. However, none of the PZ nonsense mutants exhibited increased IFN-γ sensitivity in cell culture or were profoundly attenuated in a murine genital tract infection model. Our results suggest that C. muridarum PZ genes are transcribed--and some may produce functional proteins--but are dispensable for infection of the murine genital tract.

Indexed as

Genome, BacterialAnimalsChlamydia InfectionsChlamydia muridarumChlamydia trachomatisCodon, NonsenseDNA Mutational AnalysisFemaleMice, Inbred C57BLVirulenceVirulence FactorsCodon, NonsenseVirulence Factors

Identifiers

PMID25939505
PMCPMC4468545
OpenAlexW2106635287

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.