ArticleMammalian genome : official journal of the International Mammalian Genome Society2015
GXD: a community resource of mouse Gene Expression Data.
Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
20 citing papers in PubMed.
- The mouse Gene Expression Database (GXD): 2026 update.Nucleic acids research · 2026Article
- Bridging mouse and human anatomies; a knowledge-based approach to comparative anatomy for disease model phenotyping.Mammalian genome : official journal of the International Mammalian Genome Society · 2023Review
- Mouse Genome Informatics (MGI): latest news from MGD and GXD.Mammalian genome : official journal of the International Mammalian Genome Society · 2022Article
- Loss of PRC2 subunits primes lineage choice during exit of pluripotency.Nature communications · 2021Article
- GXD's RNA-Seq and Microarray Experiment Search: using curated metadata to reliably find mouse expression studies of interest.Database : the journal of biological databases and curation · 2020Article
- A dynamic view of the proteomic landscape during differentiation of ReNcell VM cells, an immortalized human neural progenitor line.Scientific data · 2019Article
- The mouse Gene Expression Database (GXD): 2019 update.Nucleic acids research · 2019Article
- Noncoding copy-number variations are associated with congenital limb malformation.Genetics in medicine : official journal of the American College of Medical Genetics · 2018Article
- Mouse Genome Informatics (MGI) Resource: Genetic, Genomic, and Biological Knowledgebase for the Laboratory Mouse.ILAR journal · 2017Review
- Article
- eMouseAtlas: An atlas-based resource for understanding mammalian embryogenesis.Developmental biology · 2017Review
- Mouse Genome Database (MGD)-2017: community knowledge resource for the laboratory mouse.Nucleic acids research · 2017Article
- The mouse Gene Expression Database (GXD): 2017 update.Nucleic acids research · 2017Article
- Effective biomedical document classification for identifying publications relevant to the mouse Gene Expression Database (GXD).Database : the journal of biological databases and curation · 2017Article
- Accelerating Adverse Outcome Pathway Development Using Publicly Available Data Sources.Current environmental health reports · 2016Review
- Mouse genome database 2016.Nucleic acids research · 2016Article
- Mouse anatomy ontologies: enhancements and tools for exploring and integrating biomedical data.Mammalian genome : official journal of the International Mammalian Genome Society · 2015Article
- Mouse Genome Informatics (MGI): reflecting on 25 years.Mammalian genome : official journal of the International Mammalian Genome Society · 2015Review
- Orthology for comparative genomics in the mouse genome database.Mammalian genome : official journal of the International Mammalian Genome Society · 2015Review
- The pattern of congenital heart defects arising from reduced Tbx5 expression is altered in a Down syndrome mouse model.BMC developmental biology · 2015Article
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Authors and funding
9 authors.
Funding
Abstract
The Gene Expression Database (GXD) is an extensive, easily searchable, and freely available database of mouse gene expression information (www.informatics.jax.org/expression.shtml). GXD was developed to foster progress toward understanding the molecular basis of human development and disease. GXD contains information about when and where genes are expressed in different tissues in the mouse, especially during the embryonic period. GXD collects different types of expression data from wild-type and mutant mice, including RNA in situ hybridization, immunohistochemistry, RT-PCR, and northern and western blot results. The GXD curators read the scientific literature and enter the expression data from those papers into the database. GXD also acquires expression data directly from researchers, including groups doing large-scale expression studies. GXD currently contains nearly 1.5 million expression results for over 13,900 genes. In addition, it has over 265,000 images of expression data, allowing users to retrieve the primary data and interpret it themselves. By being an integral part of the larger Mouse Genome Informatics (MGI) resource, GXD's expression data are combined with other genetic, functional, phenotypic, and disease-oriented data. This allows GXD to provide tools for researchers to evaluate expression data in the larger context, search by a wide variety of biologically and biomedically relevant parameters, and discover new data connections to help in the design of new experiments. Thus, GXD can provide researchers with critical insights into the functions of genes and the molecular mechanisms of development, differentiation, and disease.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.