Evidence map›Paper›PMID 25938667›Full record

ArticlePloS one2015

Prevalent HLA Class II Alleles in Mexico City Appear to Confer Resistance to the Development of Amebic Liver Abscess.

Eric G Hernández, Julio Granados, Oswaldo Partida-Rodríguez, Olivia Valenzuela, Edgar Rascón, Ulises Magaña, Mónica Escamilla-Tilch, Alberto López-Reyes, Miriam Nieves-Ramírez, Enrique González and 7 more

Abstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Amebiasis in Mexico, 2014-2023.Emerging infectious diseases · 2025
    Article
  3. Review
  4. Antiprotozoal Constituents fromPharmacognosy magazine
    Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Eric G HernándezLaboratorio de Inmunología, Departamento de Medicina Experimental, Facultad de Medicina, UNAM, Mexico City, México.
Julio GranadosDivisión de Inmunogenética, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán (INCMNSZ), SSa, Mexico City, México.
Oswaldo Partida-RodríguezLaboratorio de Inmunología, Departamento de Medicina Experimental, Facultad de Medicina, UNAM, Mexico City, México.
Olivia ValenzuelaDepartamento de Ciencias Químico-Biológicas, Universidad de Sonora, Hermosillo, Sonora, México.
Edgar RascónDepartamento de Ciencias Químico-Biológicas, Universidad de Sonora, Hermosillo, Sonora, México.
Ulises MagañaDepartamento de Ciencias Químico-Biológicas, Universidad de Sonora, Hermosillo, Sonora, México.
Mónica Escamilla-TilchDivisión de Inmunogenética, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán (INCMNSZ), SSa, Mexico City, México.
Alberto López-ReyesLaboratorio de Sinovioanálisis Molecular, Instituto Nacional de Rehabilitación, SSa, Mexico City, México.
Miriam Nieves-RamírezLaboratorio de Inmunología, Departamento de Medicina Experimental, Facultad de Medicina, UNAM, Mexico City, México.
Enrique GonzálezLaboratorio de Inmunología, Departamento de Medicina Experimental, Facultad de Medicina, UNAM, Mexico City, México.
Patricia MoránLaboratorio de Inmunología, Departamento de Medicina Experimental, Facultad de Medicina, UNAM, Mexico City, México.
Liliana RojasLaboratorio de Inmunología, Departamento de Medicina Experimental, Facultad de Medicina, UNAM, Mexico City, México.
Alicia ValadezLaboratorio de Inmunología, Departamento de Medicina Experimental, Facultad de Medicina, UNAM, Mexico City, México.
Alexandra LunaLaboratorio de Biología Molecular, Escuela de Medicina, Universidad Panamericana, Mexico City, México.
Francisco J EstradaLaboratorio de Biología Molecular, Escuela de Medicina, Universidad Panamericana, Mexico City, México.
Carmen MaldonadoLaboratorio de Investigación en Inmunología y proteómica, Hospital Infantil de México Federico Gómez, SSa, Mexico City, México.
Cecilia XiménezLaboratorio de Inmunología, Departamento de Medicina Experimental, Facultad de Medicina, UNAM, Mexico City, México.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Amebiasis is an endemic disease and a public health problem throughout Mexico, although the incidence rates of amebic liver abscess (ALA) vary among the geographic regions of the country. Notably, incidence rates are high in the northwestern states (especially Sonora with a rate of 12.57/100,000 inhabitants) compared with the central region (Mexico City with a rate of 0.69/100,000 inhabitants). These data may be related to host genetic factors that are partially responsible for resistance or susceptibility. Therefore, we studied the association of the HLA-DRB1 and HLA-DQB1 alleles with resistance or susceptibility to ALA in two Mexican populations, one each from Mexico City and Sonora. Ninety ALA patients were clinically diagnosed by serology and sonography. Genomic DNA was extracted from peripheral blood mononuclear cells. To establish the genetic identity of both populations, 15 short tandem repeats (STRs) were analyzed with multiplexed PCR, and the allelic frequencies of HLA were studied by PCR-SSO using LUMINEX technology. The allele frequencies obtained were compared to an ethnically matched healthy control group (146 individuals). We observed that both affected populations differed genetically from the control group. We also found interesting trends in the population from Mexico City. HLA-DQB1*02 allele frequencies were higher in ALA patients compared to the control group (0.127 vs 0.047; p= 0.01; pc= NS; OR= 2.9, 95% CI= 1.09-8.3). The less frequent alleles in ALA patients were HLA-DRB1*08 (0.118 vs 0.238 in controls; p= 0.01; pc= NS; OR= 0.42, 95% CI= 0.19-0.87) and HLA-DQB1*04 (0.109 vs 0.214; p= 0.02; pc= NS; OR= 0.40, 95% CI= 0.20-0.94). The haplotype HLA-DRB1*08/-DQB1*04 also demonstrated a protective trend against the development of this disease (0.081 vs. 0.178; p=0.02; pc=NS; OR= 0.40, 95% CI= 0.16-0.93). These trends suggest that the prevalent alleles in the population of Mexico City may be associated with protection against the development of ALA.

Indexed as

AllelesCase-Control StudiesDisease ResistanceFemaleGene FrequencyGenetic Predisposition to DiseaseGeographyHistocompatibility Antigens Class IHistocompatibility Antigens Class IIHistocompatibility TestingHumansLiver Abscess, AmebicMaleMexicoPrevalenceHistocompatibility Antigens Class IHistocompatibility Antigens Class II

Identifiers

PMID25938667
PMCPMC4418702

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.