ArticleDoklady. Biochemistry and biophysics2015
Sequencing of the complete genome of an araphid pennate diatom Synedra acus subsp. radians from Lake Baikal.
Article in Doklady. Biochemistry and biophysics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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Who cites it
20 citing papers in PubMed.
- The genome of Pleurosigma provides insights into the evolutionary adaptations of pelagic diatoms.DNA research : an international journal for rapid publication of reports on genes and genomes · 2026Article
- Annotation of protein-coding genes in 49 diatom genomes from the Bacillariophyta clade.Scientific data · 2025Article
- Three reference genomes for freshwater diatom ecology and evolution.Journal of phycology · 2025Article
- High-quality genome assembly and annotation of Thalassiosira rotula (synonym of Thalassiosira gravida).Scientific data · 2025Article
- First regional reference database of northern Adriatic diatom transcriptomes.Scientific reports · 2024Article
- Differential Expression of Stress Adaptation Genes in a DiatomInternational journal of molecular sciences · 2024Article
- Analysis of Predicted Amino Acid Sequences of Diatom Microtubule Center Components.International journal of molecular sciences · 2023Article
- Molecular Insights into Lipoxygenases in Diatoms Based on Structure Prediction: a Pioneering Study on Lipoxygenases Found in Pseudo-nitzschia arenysensis and Fragilariopsis cylindrus.Marine biotechnology (New York, N.Y.) · 2022Review
- What Was Old Is New Again: The Pennate DiatomMarine drugs · 2022Review
- Re-examination of two diatom reference genomes using long-read sequencing.BMC genomics · 2021Article
- Iron metabolism strategies in diatoms.Journal of experimental botany · 2021Review
- Phylogenomic fingerprinting of tempo and functions of horizontal gene transfer within ochrophytes.Proceedings of the National Academy of Sciences of the United States of America · 2021Article
- The Seminavis robusta genome provides insights into the evolutionary adaptations of benthic diatoms.Nature communications · 2020Article
- Genome-enabled phylogenetic and functional reconstruction of an araphid pennate diatom Plagiostriata sp. CCMP470, previously assigned as a radial centric diatom, and its bacterial commensal.Scientific reports · 2020Article
- De novo transcriptome assembly and analysis of the freshwater araphid diatom Fragilaria radians, Lake Baikal.Scientific data · 2019Article
- Article
- A family of silicon transporter structural genes in a pennate diatom Synedra ulna subsp. danica (Kütz.) Skabitsch.PloS one · 2018Article
- Intracellular metabolic pathway distribution in diatoms and tools for genome-enabled experimental diatom research.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017Review
- Chimeric origins of ochrophytes and haptophytes revealed through an ancient plastid proteome.eLife · 2017Article
- Unique configuration of genes of silicon transporter in the freshwater pennate diatom Synedra acus subsp. radians.Doklady. Biochemistry and biophysics · 2016Article
Corrections and comments
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Authors and funding
11 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
High-throughput method of sequencing was applied to determine the complete nucleotide sequence of an araphid pennate diatom Synedra acus subsp. radians from Lake Baikal (East Siberia). The assembled genome has a total length of 98 Mbp, the mean coverage is 33x. Structure-functional annotation of the genome was performed.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.