ArticleJournal of microbiology (Seoul, Korea)2015
Genome sequence analysis of potential probiotic strain Leuconostoc lactis EFEL005 isolated from kimchi.
Article in Journal of microbiology (Seoul, Korea), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
What it found
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Who cites it
9 citing papers in PubMed, 17 citations in OpenAlex.
- Review
- Genomic and Phenotypic Evaluation of Potential Probiotic Pediococcus Strains with Hypocholesterolemic Effect Isolated from Traditional Fermented Food.Probiotics and antimicrobial proteins · 2022Article
- ODFM, an omics data resource from microorganisms associated with fermented foods.Scientific data · 2021Article
- Exploring Antibiotic Resistance Diversity inMicroorganisms · 2021Article
- Functional Identification of the Dextransucrase Gene ofInternational journal of molecular sciences · 2020Article
- Improvement of the Sensory Characteristics of Goat Milk Yogurt.Journal of food science · 2019Article
- Lactobacillus allii sp. nov. isolated from scallion kimchi.International journal of systematic and evolutionary microbiology · 2017Article
- Genomic Analysis ofFrontiers in microbiology · 2016Article
- Systems Biology of Microbial Exopolysaccharides Production.Frontiers in bioengineering and biotechnology · 2015Review
Corrections and comments
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Authors and funding
6 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Leuconostoc lactis EFEL005 (KACC 91922) isolated from kimchi showed promising probiotic attributes; resistance against acid and bile salts, absence of transferable genes for antibiotic resistance, broad utilization of prebiotics, and no hemolytic activity. To expand our understanding of the species, we generated a draft genome sequence of the strain and analyzed its genomic features related to the aforementioned probiotic properties. Genome assembly resulted in 35 contigs, and the draft genome has 1,688,202 base pairs (bp) with a G+C content of 43.43%, containing 1,644 protein-coding genes and 50 RNA genes. The average nucleotide identity analysis showed high homology (≥ 96%) to the type strain L. lactis KCTC3528, but low homology (≤ 95%) to L. lactis KCTC3773 (formerly L. argentinum). Genomic analysis revealed the presence of various genes for sucrose metabolism (glucansucrases, invertases, sucrose phosphorylases, and mannitol dehydrogenase), acid tolerance (F1F0 ATPases, cation transport ATPase, branched-chain amino acid permease, and lysine decarboxylase), vancomycin response regulator, and antibacterial peptide (Lactacin F). No gene for production of biogenic amines (histamine and tyramine) was found. This report will facilitate the understanding of probiotic properties of this strain as a starter for fermented foods.
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