Evidence map›Paper›PMID 25932456›Full record

ArticleFrontiers in cellular and infection microbiology2015

XocR, a LuxR solo required for virulence in Xanthomonas oryzae pv. oryzicola.

Huiyong Xu, Yancun Zhao, Guoliang Qian, Fengquan Liu

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
4.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Effects ofMicrobiology spectrum · 2024
    Article
  3. Structural basis for a bacterial Pip system plant effector recognition protein.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  4. LuxR Solos in the Plant EndophyteApplied and environmental microbiology · 2020
    Article
  5. Article
  6. A plant-responsive bacterial-signaling system senses an ethanolamine derivative.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  7. Melatonin Treatment Inhibits the Growth ofFrontiers in microbiology · 2018
    Article
  8. Article
  9. Clinical and Genomic Analysis of Liver Abscess-CausingFrontiers in cellular and infection microbiology · 2016
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Huiyong XuInstitute of Plant Protection, Jiangsu Academy of Agricultural Science Nanjing, China ; College of Plant Protection, Nanjing Agricultural University Nanjing, China ; Key Laboratory of Integrated Management of Crop Diseases and Pests (Nanjing Agricultural University), Ministry of Education Nanjing, China.
Yancun ZhaoInstitute of Plant Protection, Jiangsu Academy of Agricultural Science Nanjing, China.
Guoliang QianCollege of Plant Protection, Nanjing Agricultural University Nanjing, China ; Key Laboratory of Integrated Management of Crop Diseases and Pests (Nanjing Agricultural University), Ministry of Education Nanjing, China.
Fengquan LiuInstitute of Plant Protection, Jiangsu Academy of Agricultural Science Nanjing, China ; College of Plant Protection, Nanjing Agricultural University Nanjing, China ; Key Laboratory of Integrated Management of Crop Diseases and Pests (Nanjing Agricultural University), Ministry of Education Nanjing, China.
Institute of Plant Protection · CNNanjing Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Xanthomonas oryzae pv. oryzicola (Xoc) causes bacterial leaf streak (BLS) in rice, a serious bacterial disease of rice in Asia and parts of Africa. The virulence mechanisms of Xoc are not entirely clear and control measures for BLS are poorly developed. The solo LuxR proteins are widespread and shown to be involved in virulence in some plant associated bacteria (PAB). Here, we have cloned and characterized a PAB LuxR solo from Xoc, named as XocR. Mutation of xocR almost completely impaired the virulence ability of Xoc on host rice, but did not alter the ability to trigger HR (hypersensitive response, a programmed cell death) on non-host (plant) tobacco, suggesting the diversity of function of xocR in host and non-host plants. We also provide evidence to show that xocR is involved in the regulation of growth-independent cell motility in response to a yet-to-be-identified rice signal, as mutation of xocR impaired cell swimming motility of wild-type Rs105 in the presence but not absence of rice macerate. We further found that xocR regulated the transcription of two characterized virulence-associated genes (recN and trpE) in the presence of rice macerate. The promoter regions of recN and trpE possessed a potential binding motif (an imperfect pip box-like element) of XocR, raising the possibility that XocR might directly bind the promoter regions of these two genes to regulate their transcriptional activity. Our studies add a new member of PAB LuxR solos and also provide new insights into the role of PAB LuxR solo in the virulence of Xanthomonas species.

Indexed as

Gene Expression Regulation, BacterialAmino Acid SequenceApoptosisBinding SitesCloning, MolecularGene DeletionGene Expression ProfilingLocomotionMolecular Sequence DataNicotianaOryzaPlant DiseasesPlant ExtractsPromoter Regions, GeneticRepressor ProteinsSequence Homology, Amino AcidLuxR autoinducer binding proteinsPlant ExtractsRepressor ProteinsTrans-ActivatorsLuxRmotilityQSvirulenceXoc

Identifiers

PMID25932456
PMCPMC4399327
OpenAlexW2045518439

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.