Evidence map›Paper›PMID 25931590›Full record

ArticleGenome announcements2015

Thirty-Two Complete Genome Assemblies of Nine Yersinia Species, Including Y. pestis, Y. pseudotuberculosis, and Y. enterocolitica.

Shannon L Johnson, Hajnalka E Daligault, Karen W Davenport, James Jaissle, Kenneth G Frey, Jason T Ladner, Stacey M Broomall, Kimberly A Bishop-Lilly, David C Bruce, Susan R Coyne and 10 more

Abstract read
In one paragraph

Article in Genome announcements, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
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  4. TAK1 inhibition elicits mitochondrial ROS to block intracellular bacterial colonization.Proceedings of the National Academy of Sciences of the United States of America · 2021
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  12. Changes in Transcriptome ofFrontiers in cellular and infection microbiology · 2018
    Article
  13. Article
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  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Shannon L JohnsonLos Alamos National Laboratory (LANL), Los Alamos, New Mexico, USA shannonj@lanl.gov.ORCID http://orcid.org/0000-0002-3972-9208
Hajnalka E DaligaultLos Alamos National Laboratory (LANL), Los Alamos, New Mexico, USA.
Karen W DavenportLos Alamos National Laboratory (LANL), Los Alamos, New Mexico, USA.
James JaissleUnited States Army Medical Research Institute of Infectious Diseases (USAMRIID) Diagnostic Systems Division (DSD), Fort Detrick, Maryland, USA.
Kenneth G Frey
Jason T LadnerCenter for Genome Sciences (CGS), United States Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, Maryland, USA.
Stacey M BroomallUnited States Army Edgewood Chemical Biological Center (ECBC), Aberdeen Proving Ground, Aberdeen, Maryland, USA.
Kimberly A Bishop-Lilly
David C BruceLos Alamos National Laboratory (LANL), Los Alamos, New Mexico, USA.
Susan R CoyneUnited States Army Medical Research Institute of Infectious Diseases (USAMRIID) Diagnostic Systems Division (DSD), Fort Detrick, Maryland, USA.
Henry S GibbonsUnited States Army Edgewood Chemical Biological Center (ECBC), Aberdeen Proving Ground, Aberdeen, Maryland, USA.
Chien-Chi LoLos Alamos National Laboratory (LANL), Los Alamos, New Mexico, USA.
A Christine MunkLos Alamos National Laboratory (LANL), Los Alamos, New Mexico, USA.
C Nicole RosenzweigUnited States Army Edgewood Chemical Biological Center (ECBC), Aberdeen Proving Ground, Aberdeen, Maryland, USA.
Galina I KorolevaCenter for Genome Sciences (CGS), United States Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, Maryland, USA.
Gustavo F PalaciosCenter for Genome Sciences (CGS), United States Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, Maryland, USA.
Cassie L Redden
Yan XuLos Alamos National Laboratory (LANL), Los Alamos, New Mexico, USA.
Timothy D MinogueUnited States Army Medical Research Institute of Infectious Diseases (USAMRIID) Diagnostic Systems Division (DSD), Fort Detrick, Maryland, USA.
Patrick S ChainLos Alamos National Laboratory (LANL), Los Alamos, New Mexico, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genus Yersinia includes three human pathogens, of which Yersinia pestis is responsible for >2,000 illnesses each year. To aid in the development of detection assays and aid further phylogenetic elucidation, we sequenced and assembled the complete genomes of 32 strains (across 9 Yersinia species).

Identifiers

PMID25931590
PMCPMC4417686

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.