Evidence map›Paper›PMID 25928534›Full record

ArticleBMC medical genetics2015

Novel domain-specific POU3F4 mutations are associated with X-linked deafness: examples from different populations.

Guney Bademci, Akeem Lasisi, Kemal O Yariz, Paola Montenegro, Ibis Menendez, Rodrigo Vinueza, Rosario Paredes, Germania Moreta, Asli Subasioglu, Susan Blanton and 4 more

Open access · goldAbstract read
In one paragraph

Article in BMC medical genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

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  15. Medical genetics and genomic medicine in Nigeria.Molecular genetics & genomic medicine · 2018
    Article
  16. AChinese medical journal · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Guney BademciJohn P. Hussmann Institute for Human Genomics and John T. Macdonald Foundation, Department of Human Genetics, Miller school of Medicine, University of Miami, 1501 NW 10th Avenue, BRB-610 (M-860), Miami, FL, 33136, USA. g.bademci@med.miami.edu.
Akeem LasisiJohn P. Hussmann Institute for Human Genomics and John T. Macdonald Foundation, Department of Human Genetics, Miller school of Medicine, University of Miami, 1501 NW 10th Avenue, BRB-610 (M-860), Miami, FL, 33136, USA. akeemlasisi@gmail.com.
Kemal O YarizJohn P. Hussmann Institute for Human Genomics and John T. Macdonald Foundation, Department of Human Genetics, Miller school of Medicine, University of Miami, 1501 NW 10th Avenue, BRB-610 (M-860), Miami, FL, 33136, USA. koyariz@gmail.com.
Paola MontenegroDepartamento de Genetica, Hospital de Especialidades FFAA, Quito, Ecuador. paom14@gmail.com.
Ibis MenendezJohn P. Hussmann Institute for Human Genomics and John T. Macdonald Foundation, Department of Human Genetics, Miller school of Medicine, University of Miami, 1501 NW 10th Avenue, BRB-610 (M-860), Miami, FL, 33136, USA. IMenendez1@med.miami.edu.
Rodrigo VinuezaDepartamento de Genetica, Hospital de Especialidades FFAA, Quito, Ecuador. genmolhg1@gmail.com.
Rosario ParedesDepartamento de Genetica, Hospital de Especialidades FFAA, Quito, Ecuador. charoparedes@yahoo.fr.
Germania MoretaDepartamento de Genetica, Hospital de Especialidades FFAA, Quito, Ecuador. germaniamoreta@yahoo.com.
Asli SubasiogluJohn P. Hussmann Institute for Human Genomics and John T. Macdonald Foundation, Department of Human Genetics, Miller school of Medicine, University of Miami, 1501 NW 10th Avenue, BRB-610 (M-860), Miami, FL, 33136, USA. asuzak78@hotmail.com.
Susan BlantonJohn P. Hussmann Institute for Human Genomics and John T. Macdonald Foundation, Department of Human Genetics, Miller school of Medicine, University of Miami, 1501 NW 10th Avenue, BRB-610 (M-860), Miami, FL, 33136, USA. SBlanton@med.miami.edu.
Suat FitozDepartment of Radiodiagnostics, Ankara University School of Medicine, Ankara, Turkey. sfitoz@yahoo.com.
Armagan IncesuluDepartment of Otorhinolaryngology, Eskisehir Osmangazi University School of Medicine, Eskisehir, Turkey. armaganincesulu@yahoo.com.
Levent SennarogluDepartment of Otorhinolaryngology, Hacettepe University School of Medicine, Ankara, Turkey. lsennaroglu@gmail.com.
Mustafa TekinJohn P. Hussmann Institute for Human Genomics and John T. Macdonald Foundation, Department of Human Genetics, Miller school of Medicine, University of Miami, 1501 NW 10th Avenue, BRB-610 (M-860), Miami, FL, 33136, USA. mtekin@med.miami.edu.
University of Ibadan · NG

Funding

A Collaborative Search for New Genes for Non-Syndromic DeafnessR01DC009645 · NIDCD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI MUSTAFA TEKIN · 2010 to 2026
$11.8M
Genetic Studies of Inner Ear AnomaliesR01DC012836 · NIDCD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI TEKIN, MUSTAFA · 2013 to 2017
$3.2M
NIDCD NIH HHS R01 DC009645NIDCD NIH HHS R01 DC012836NIDCD NIH HHS R01DC012836
6 · The paper itself

Abstract

backgroundMutations in the POU3F4 gene cause X-linked deafness type 3 (DFN3), which is characterized by inner ear anomalies.

methodsThree Turkish, one Ecuadorian, and one Nigerian families were included based on either inner ear anomalies detected in probands or X-linked family histories. Exome sequencing and/or Sanger sequencing were performed in order to identify the causative DNA variants in these families.

resultsFour novel, c.707A>C (p.(Glu236Ala)), c.772delG (p.(Glu258ArgfsX30)), c.902C>T (p.(Pro301Leu)), c.987T>C (p.(Ile308Thr)), and one previously reported mutation c.346delG (p.(Ala116ProfsX26)) in POU3F4, were identified. All mutations identified are predicted to affect the POU-specific or POU homeo domains of the protein and co-segregated with deafness in all families.

conclusionsExpanding the spectrum of POU3F4 mutations in different populations along with their associated phenotypes provides better understanding of their clinical importance and will be helpful in clinical evaluation and counseling of the affected individuals.

Indexed as

Child, PreschoolCohort StudiesDeafnessFemaleGenetic Diseases, X-LinkedHumansMaleModels, MolecularPedigreePOU Domain FactorsProtein Structure, TertiaryPOU3F4 protein, humanPOU Domain Factors

Identifiers

PMID25928534
PMCPMC4422282
OpenAlexW2017041503

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.