Evidence map›Paper›PMID 25928096›Full record

ArticleMolecular cancer2015

Characterization of 46 patient-specific BCR-ABL1 fusions and detection of SNPs upstream and downstream the breakpoints in chronic myeloid leukemia using next generation sequencing.

Jana Linhartova, Lenka Hovorkova, Simona Soverini, Adela Benesova, Monika Jaruskova, Hana Klamova, Jan Zuna, Katerina Machova Polakova

Open access · goldAbstract readLetter
In one paragraph

Article in Molecular cancer, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  4. Review
  5. Article
  6. Article
  7. Haematologica · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Jana LinhartovaInstitute of Hematology and Blood Transfusion, Prague, Czech Republic. jana.linhartova@uhkt.cz.
Lenka HovorkovaCLIP, Department of Paediatric Haematology and Oncology, 2nd Faculty of Medicine, Charles University Prague and University Hospital Motol, Prague, Czech Republic. lenka.hovorkova@lfmotol.cuni.cz.
Simona SoveriniDepartment of Experimental, Diagnostic and Specialty Medicine, Institute of Hematology "L. e A. Seragnoli", University of Bologna, Bologna, Italy. simona.soverini@tin.it.
Adela BenesovaInstitute of Hematology and Blood Transfusion, Prague, Czech Republic. adela.brouckova@uhkt.cz.
Monika JaruskovaInstitute of Hematology and Blood Transfusion, Prague, Czech Republic. monika.jaruskova@uhkt.cz.
Hana KlamovaInstitute of Hematology and Blood Transfusion, Prague, Czech Republic. hana.klamova@uhkt.cz.
Jan ZunaCLIP, Department of Paediatric Haematology and Oncology, 2nd Faculty of Medicine, Charles University Prague and University Hospital Motol, Prague, Czech Republic. jan.zuna@lfmotol.cuni.cz.
Katerina Machova PolakovaInstitute of Hematology and Blood Transfusion, Prague, Czech Republic. katerina.machova@uhkt.cz.
Institute of Haematology and Blood Transfusion · CZCharles University · CZUniversity of Bologna · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In chronic myeloid leukemia, the identification of individual BCR-ABL1 fusions is required for the development of personalized medicine approach for minimal residual disease monitoring at the DNA level. Next generation sequencing (NGS) of amplicons larger than 1000 bp simplified and accelerated a process of characterization of patient-specific BCR-ABL1 genomic fusions. NGS of large regions upstream and downstream the individual breakpoints in BCR and ABL1 genes, respectively, also provided information about the sequence variants such are single nucleotide polymorphisms.

Indexed as

Fusion Proteins, bcr-ablHigh-Throughput Nucleotide SequencingHumansLeukemia, Myelogenous, Chronic, BCR-ABL PositivePolymorphism, Single NucleotideFusion Proteins, bcr-abl

Identifiers

PMID25928096
PMCPMC4409993
OpenAlexW2128307473

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.