Evidence map›Paper›PMID 25928042›Full record

ArticleReproductive biology and endocrinology : RB&E2015

Comparative proteomic analysis of spermatozoa isolated by swim-up or density gradient centrifugation.

Stefania Luppi, Monica Martinelli, Elisa Giacomini, Elena Giolo, Gabriella Zito, Rodolfo C Garcia, Giuseppe Ricci

Open access · goldAbstract readComparative Study
In one paragraph

Article in Reproductive biology and endocrinology : RB&E, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Stefania LuppiInstitute for Maternal and Child Health, IRCCS Burlo Garofolo, Via dell'Istria 65/1, 34137, Trieste, Italy. stefania.luppi@burlo.trieste.it.
Monica MartinelliInstitute for Maternal and Child Health, IRCCS Burlo Garofolo, Via dell'Istria 65/1, 34137, Trieste, Italy. monica.martinelli@burlo.trieste.it.
Elisa GiacominiDepartment of Medicine, Surgery and Health Sciences, University of Trieste, 34149, Trieste, Italy. elisa.giacomini@inwind.it.
Elena GioloInstitute for Maternal and Child Health, IRCCS Burlo Garofolo, Via dell'Istria 65/1, 34137, Trieste, Italy. elena.giolo@burlo.trieste.it.
Gabriella ZitoDepartment of Medicine, Surgery and Health Sciences, University of Trieste, 34149, Trieste, Italy. gabriellazito3@virgilio.it.
Rodolfo C GarciaInternational Centre for Genetic Engineering and Biotechnology (I.C.G.E.B.), Area Science Park, 34149, Trieste, Italy. garciazucconi@gmail.com.
Giuseppe RicciInstitute for Maternal and Child Health, IRCCS Burlo Garofolo, Via dell'Istria 65/1, 34137, Trieste, Italy. ricci@burlo.trieste.it.
IRCCS Materno Infantile Burlo Garofolo · ITUniversity of Trieste · ITInternational Centre for Genetic Engineering and Biotechnology · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundReports about the morphologic and functional characteristics of spermatozoa prepared by density gradient centrifugation (DC) or swim-up (SU) have produced discordant results. We have performed a proteomic comparison of cells prepared by DC and SU providing a molecular insight into the differences between these two methods of sperm cell isolation.

methodsProtein maps were obtained by 2-dimensional (2-D) separations consisting of isoelectrofocusing (IEF) from pI 3 to 11 followed by SDS-polyacrylamide gel electrophoresis. 2-D gels were stained with Sypro Ruby. Map images of DC and SU spermatozoa were compared using dedicated software. Intensities of a given spot were considered different between DC and SU when their group mean differed by >1.5-fold (p<0.05, Anova).

resultsNo differences were observed for 853 spots, indicating a 98.7% similarity between DC and SU. Five spots were DC>SU and 1 was SU>DC. Proteins present in 3 of the differential spots could be identified. One DC>SU spot contained lactate dehydrogenase C and gamma-glutamylhydrolase, a second DC>SU spot contained fumarate hydratase and glyceraldehyde-3-phosphate dehydrogenase-2, and a SU>DC spot contained pyruvate kinase M1/M2.

conclusionsThe differences in protein levels found on comparison of DC with SU spermatozoa indicate possible dissimilarities in their glycolytic metabolism and DNA methylation and suggest that DC cells may have a better capacitation potential.

Indexed as

Cell SeparationCentrifugation, Density GradientHumansMaleMass SpectrometryProteinsProteomicsSpermatozoaProteins

Identifiers

PMID25928042
PMCPMC4410587
OpenAlexW2121105373

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.