Evidence map›Paper›PMID 25927932›Full record

ArticleCell cycle (Georgetown, Tex.)2015

Cyclin D3-dependent control of the dNTP pool and HIV-1 replication in human macrophages.

Alba Ruiz, Eduardo Pauls, Roger Badia, Javier Torres-Torronteras, Eva Riveira-Muñoz, Bonaventura Clotet, Ramon Martí, Ester Ballana, José A Esté

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 41 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Alba Ruiza AIDS Research Institute-IrsiCaixa and AIDS Unit; Hospital Germans Trias i Pujol; Universitat Autonoma de Barcelona ; Badalona , Spain.
Eduardo Pauls
Roger Badia
Javier Torres-Torronteras
Eva Riveira-Muñoz
Bonaventura Clotet
Ramon Martí
Ester Ballana
José A Esté
Hospital Universitari Germans Trias i Pujol · ESUniversitat Autònoma de Barcelona · ESCentre for Biomedical Network Research on Rare Diseases · ESIrsiCaixa · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cyclins control the activation of cyclin-dependent kinases (CDK), which in turn, control the cell cycle and cell division. Intracellular availability of deoxynucleotides (dNTP) plays a fundamental role in cell cycle progression. SAM domain and HD domain-containing protein 1 (SAMHD1) degrades nucleotide triphosphates and controls the size of the dNTP pool. SAMHD1 activity appears to be controlled by CDK. Here, we show that knockdown of cyclin D3 a partner of CDK6 and E2 a partner of CDK2 had a major impact in SAMHD1 phosphorylation and inactivation and led to decreased dNTP levels and inhibition of HIV-1 at the reverse transcription step in primary human macrophages. The effect of cyclin D3 RNA interference was lost after degradation of SAMHD1 by HIV-2 Vpx, demonstrating the specificity of the mechanism. Cyclin D3 inhibition correlated with decreased activation of CDK2. Our results confirm the fundamental role of the CDK6-cyclin D3 pair in controlling CDK2-dependent SAMHD1 phosphorylation and dNTP pool in primary macrophages.

Indexed as

Models, BiologicalCyclin D3Cyclin-Dependent Kinase 6DeoxyribonucleotidesGene Knockdown TechniquesHIV-1HumansMacrophagesMonomeric GTP-Binding ProteinsPhosphorylationRNA InterferenceSAM Domain and HD Domain-Containing Protein 1Virus ReplicationCCND3 protein, humanCDK6 protein, humanCyclin D3Cyclin-Dependent Kinase 6DeoxyribonucleotidesMonomeric GTP-Binding ProteinsSAM Domain and HD Domain-Containing Protein 1SAMHD1 protein, humancyclincyclin-dependent kinaseHIV-1SAMHD1virus restriction

Identifiers

PMID25927932
PMCPMC4614030
OpenAlexW2240213927

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.