Evidence map›Paper›PMID 25927861›Full record

ArticleBMC microbiology2014

Microbiological diagnostic procedures for respiratory cystic fibrosis samples in Spain: towards standard of care practices.

Juan de Dios Caballero, Rosa del Campo, Marta Tato, Elia Gómez G de la Pedrosa, Marta Cobo, Carla López-Causapé, Enrique Gómez-Mampaso, Antonio Oliver, Rafael Cantón, Spanish Network for Cystic Fibrosis Microbiology Laboratories

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Clinical and microbiological profile of chronic Burkholderia cepacia complex infections in a cystic fibrosis reference hospital in Brazil.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2017
    Article
  2. Brazilian guidelines for the diagnosis and treatment of cystic fibrosis.Jornal brasileiro de pneumologia : publicacao oficial da Sociedade Brasileira de Pneumologia e Tisilogia
    Article
  3. A practical molecular identification of nonfermenting Gram-negative bacteria from cystic fibrosis.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Juan de Dios CaballeroServicio de Microbiología, Hospital Universitario Ramón y Cajal and Instituto Ramón y Cajal de Investigaciones Sanitarias (IRYCIS), Madrid, 28034, Spain. juan.dcaballero@gmail.com.
Rosa del CampoServicio de Microbiología, Hospital Universitario Ramón y Cajal and Instituto Ramón y Cajal de Investigaciones Sanitarias (IRYCIS), Madrid, 28034, Spain. rosacampo@yahoo.com.
Marta TatoServicio de Microbiología, Hospital Universitario Ramón y Cajal and Instituto Ramón y Cajal de Investigaciones Sanitarias (IRYCIS), Madrid, 28034, Spain. marta.tato@salud.madrid.org.
Elia Gómez G de la PedrosaServicio de Microbiología, Hospital Universitario Ramón y Cajal and Instituto Ramón y Cajal de Investigaciones Sanitarias (IRYCIS), Madrid, 28034, Spain. elia.gomez@gmail.com.
Marta CoboServicio de Microbiología, Hospital Universitario Ramón y Cajal and Instituto Ramón y Cajal de Investigaciones Sanitarias (IRYCIS), Madrid, 28034, Spain. martita_cobo@hotmail.com.
Carla López-CausapéRed Española de Investigación en Patología Infecciosa (REIPI), Madrid, Spain. carla.lopez@ssib.es.
Enrique Gómez-MampasoServicio de Microbiología, Hospital Universitario Ramón y Cajal and Instituto Ramón y Cajal de Investigaciones Sanitarias (IRYCIS), Madrid, 28034, Spain. egomezm@salud.madrid.org.
Antonio OliverRed Española de Investigación en Patología Infecciosa (REIPI), Madrid, Spain. antonio.oliver@ssib.es.
Rafael CantónServicio de Microbiología, Hospital Universitario Ramón y Cajal and Instituto Ramón y Cajal de Investigaciones Sanitarias (IRYCIS), Madrid, 28034, Spain. rafael.canton@salud.madrid.org.
Spanish Network for Cystic Fibrosis Microbiology Laboratories
Red Espanola de Investigacion en Patologia Infecciosa · ESInstituto Ramón y Cajal de Investigación Sanitaria · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe microbiological procedures for cystic fibrosis (CF) samples of 17 participating Spanish centers were examined to verify their compliance with current international and national guidelines and to implement the best standards of care for microbiology practices. A 47-item questionnaire covering different CF microbiology aspects was sent to participant laboratories. Telephone interviews were performed when necessary. Data about samples processing for bacteria, mycobacteria and fungi were collected.

resultsGene sequencing (71%), MALDI-TOF (59%) or both (94%) were available for most laboratories. Susceptibility testing was performed by automated microdilution systems (94%) and manual diffusion methods (59%). However, a low use of selective media for Staphylococcus aureus (59%) and Burkholderia cepacia complex (71%), and of epidemiological typing methods (41%) was reported.

conclusionsMost Spanish laboratories are in agreement with consensus guidelines for the processing of CF respiratory samples, but need to improve in the use of specific selective media and typing methods for epidemiologic studies.

Indexed as

Burkholderia cepaciaBurkholderia InfectionsCystic FibrosisHumansLaboratoriesMicrobiological TechniquesRespiratory Tract InfectionsSpainSpecimen HandlingSputumStandard of CareStaphylococcal InfectionsStaphylococcus aureus

Identifiers

PMID25927861
PMCPMC4302700
OpenAlexW2083417870

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.