Evidence map›Paper›PMID 25926981›Full record

ReviewF1000prime reports2015

The hunt for origins of DNA replication in multicellular eukaryotes.

John M Urban, Michael S Foulk, Cinzia Casella, Susan A Gerbi

Open access · diamondAbstract readReview
In one paragraph

Review in F1000prime reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Insects · 2024
    Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Genomic methods for measuring DNA replication dynamics.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2020
    Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Regulation of Replication Origins.Advances in experimental medicine and biology · 2017
    Review
  14. Article
  15. Article
  16. Review
  17. Review
  18. Replication landscape of the human genome.Nature communications · 2016
    Article
  19. Replication dynamics in fission and budding yeasts through DNA polymerase tracking.BioEssays : news and reviews in molecular, cellular and developmental biology · 2015
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

John M UrbanDivision of Biology and Medicine, Department of Molecular Biology, Cell Biology and Biochemistry, Brown University Sidney Frank Hall, 185 Meeting Street, Providence, RI 02912 USA.
Michael S FoulkDivision of Biology and Medicine, Department of Molecular Biology, Cell Biology and Biochemistry, Brown University Sidney Frank Hall, 185 Meeting Street, Providence, RI 02912 USA ; Department of Biology, Mercyhurst University 501 East 38th Street, Erie, PA 16546 USA.
Cinzia CasellaDivision of Biology and Medicine, Department of Molecular Biology, Cell Biology and Biochemistry, Brown University Sidney Frank Hall, 185 Meeting Street, Providence, RI 02912 USA ; Institute for Molecular Medicine, University of Southern Denmark JB Winsloews Vej 25, 5000 Odense C Denmark.
Susan A GerbiDivision of Biology and Medicine, Department of Molecular Biology, Cell Biology and Biochemistry, Brown University Sidney Frank Hall, 185 Meeting Street, Providence, RI 02912 USA.
Brown University · USMercyhurst University · US

Funding

TRAINING IN MOLECULAR &CELL BIOLOGY &BIOCHEMISTRYT32GM007601 · NIGMS · BROWN UNIVERSITY · PI MOWRY, KIMBERLY L. · 1985 to 2019
$6.4M
NIGMS NIH HHS T32 GM007601
6 · The paper itself

Abstract

Origins of DNA replication (ORIs) occur at defined regions in the genome. Although DNA sequence defines the position of ORIs in budding yeast, the factors for ORI specification remain elusive in metazoa. Several methods have been used recently to map ORIs in metazoan genomes with the hope that features for ORI specification might emerge. These methods are reviewed here with analysis of their advantages and shortcomings. The various factors that may influence ORI selection for initiation of DNA replication are discussed.

Identifiers

PMID25926981
PMCPMC4371235
OpenAlexW2315593216

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.