Evidence map›Paper›PMID 25926768›Full record

ArticleFrontiers in molecular neuroscience2015

Imaging activity in astrocytes and neurons with genetically encoded calcium indicators following in utero electroporation.

J Michael Gee, Meredith B Gibbons, Marsa Taheri, Sierra Palumbos, S Craig Morris, Roy M Smeal, Katherine F Flynn, Michael N Economo, Christian G Cizek, Mario R Capecchi and 3 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in molecular neuroscience, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Article
  3. Astrocyte-specific CaBiochemistry and cell biology = Biochimie et biologie cellulaire · 2023
    Review
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  7. Article
  8. Article
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  10. Astrocytic Calcium and cAMP in Neurodegenerative Diseases.Frontiers in cellular neuroscience · 2022
    Review
  11. Lighting Up CaCells · 2021
    Review
  12. Review
  13. Review
  14. Article
  15. Review
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  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

J Michael GeeNeuronal Dynamics Laboratory, Department of Bioengineering, University of Utah Salt Lake City, UT, USA ; MD-PhD Program, University of Utah Salt Lake City, UT, USA.
Meredith B GibbonsGlial-Neuronal Interactions in Epilepsy Laboratory, Department of Pharmacology and Toxicology, University of Utah Salt Lake City, UT, USA ; Interdepartmental Program in Neuroscience, University of Utah Salt Lake City, UT, USA.
Marsa TaheriNeuronal Dynamics Laboratory, Department of Bioengineering, University of Utah Salt Lake City, UT, USA.
Sierra PalumbosMario Capecchi Laboratory, Department of Human Genetics, University of Utah Salt Lake City, UT, USA.
S Craig MorrisNeuronal Dynamics Laboratory, Department of Bioengineering, University of Utah Salt Lake City, UT, USA ; Mario Capecchi Laboratory, Department of Human Genetics, University of Utah Salt Lake City, UT, USA.
Roy M SmealGlial-Neuronal Interactions in Epilepsy Laboratory, Department of Pharmacology and Toxicology, University of Utah Salt Lake City, UT, USA.
Katherine F FlynnGlial-Neuronal Interactions in Epilepsy Laboratory, Department of Pharmacology and Toxicology, University of Utah Salt Lake City, UT, USA.
Michael N EconomoNeuronal Dynamics Laboratory, Department of Bioengineering, University of Utah Salt Lake City, UT, USA.
Christian G CizekNeuronal Dynamics Laboratory, Department of Bioengineering, University of Utah Salt Lake City, UT, USA ; Mario Capecchi Laboratory, Department of Human Genetics, University of Utah Salt Lake City, UT, USA.
Mario R CapecchiMario Capecchi Laboratory, Department of Human Genetics, University of Utah Salt Lake City, UT, USA ; Department of Human Genetics, Howard Hughes Medical Institute, University of Utah Salt Lake City, UT, USA.
Petr TvrdikMario Capecchi Laboratory, Department of Human Genetics, University of Utah Salt Lake City, UT, USA.
Karen S WilcoxGlial-Neuronal Interactions in Epilepsy Laboratory, Department of Pharmacology and Toxicology, University of Utah Salt Lake City, UT, USA.
John A WhiteNeuronal Dynamics Laboratory, Department of Bioengineering, University of Utah Salt Lake City, UT, USA.
University of Utah · US

Funding

Calcium Signaling in a Model of Temporal Lobe EpilepsyR01NS078331 · NINDS · UNIVERSITY OF UTAH · PI WHITE, JOHN A., WILCOX, KAREN S · 2012 to 2016
$2.0M
Predoctoral Interdepartmental Training Program in NeuroscienceT32NS076067 · NINDS · UNIVERSITY OF UTAH · PI KEEFE, KRISTEN A · 2011 to 2015
$1.1M
Calcium Signaling in AstrocytesRC1NS069033 · NINDS · UNIVERSITY OF UTAH · PI WHITE, JOHN A., WILCOX, KAREN S · 2009 to 2010
$923k
Cre, Dre Dual Lineage Model for Calcium Imaging and Optogenetic ManipulationsR21OD016562 · OD · UNIVERSITY OF UTAH · PI TVRDIK, PETR · 2013 to 2014
$391k
NIH HHS R21 OD016562NINDS NIH HHS R01 NS078331NINDS NIH HHS RC1 NS069033NINDS NIH HHS T32 NS076067
6 · The paper itself

Abstract

Complex interactions between networks of astrocytes and neurons are beginning to be appreciated, but remain poorly understood. Transgenic mice expressing fluorescent protein reporters of cellular activity, such as the GCaMP family of genetically encoded calcium indicators (GECIs), have been used to explore network behavior. However, in some cases, it may be desirable to use long-established rat models that closely mimic particular aspects of human conditions such as Parkinson's disease and the development of epilepsy following status epilepticus. Methods for expressing reporter proteins in the rat brain are relatively limited. Transgenic rat technologies exist but are fairly immature. Viral-mediated expression is robust but unstable, requires invasive injections, and only works well for fairly small genes (<5 kb). In utero electroporation (IUE) offers a valuable alternative. IUE is a proven method for transfecting populations of astrocytes and neurons in the rat brain without the strict limitations on transgene size. We built a toolset of IUE plasmids carrying GCaMP variants 3, 6s, or 6f driven by CAG and targeted to the cytosol or the plasma membrane. Because low baseline fluorescence of GCaMP can hinder identification of transfected cells, we included the option of co-expressing a cytosolic tdTomato protein. A binary system consisting of a plasmid carrying a piggyBac inverted terminal repeat (ITR)-flanked CAG-GCaMP-IRES-tdTomato cassette and a separate plasmid encoding for expression of piggyBac transposase was employed to stably express GCaMP and tdTomato. The plasmids were co-electroporated on embryonic days 13.5-14.5 and astrocytic and neuronal activity was subsequently imaged in acute or cultured brain slices prepared from the cortex or hippocampus. Large spontaneous transients were detected in slices obtained from rats of varying ages up to 127 days. In this report, we demonstrate the utility of this toolset for interrogating astrocytic and neuronal activity in the rat brain.

Indexed as

astrogliacalcium imagingGCaMP3GCaMP6gene expressionneural networkrat modeltdTomato

Identifiers

PMID25926768
PMCPMC4397926
OpenAlexW1978388340

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.