Evidence map›Paper›PMID 25924616›Full record

ArticleMolecular pharmacology2015

ATP-Binding Cassette Transporter Structure Changes Detected by Intramolecular Fluorescence Energy Transfer for High-Throughput Screening.

Surtaj H Iram, Simon J Gruber, Olga N Raguimova, David D Thomas, Seth L Robia

Abstract read
In one paragraph

Article in Molecular pharmacology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. The Journal of biological chemistry · 2020
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Surtaj H IramDepartment of Cell and Molecular Physiology (S.H.I., O.N.R., S.L.R.), Cardiovascular Research Institute (O.N.R., S.L.R.), Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois; and Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, Minnesota (S.J.G., D.D.T); and Department of Chemistry and Biochemistry, South Dakota State University, Brookings, South Dakota (S.H.I.).
Simon J GruberDepartment of Cell and Molecular Physiology (S.H.I., O.N.R., S.L.R.), Cardiovascular Research Institute (O.N.R., S.L.R.), Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois; and Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, Minnesota (S.J.G., D.D.T); and Department of Chemistry and Biochemistry, South Dakota State University, Brookings, South Dakota (S.H.I.).
Olga N RaguimovaDepartment of Cell and Molecular Physiology (S.H.I., O.N.R., S.L.R.), Cardiovascular Research Institute (O.N.R., S.L.R.), Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois; and Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, Minnesota (S.J.G., D.D.T); and Department of Chemistry and Biochemistry, South Dakota State University, Brookings, South Dakota (S.H.I.).
David D ThomasDepartment of Cell and Molecular Physiology (S.H.I., O.N.R., S.L.R.), Cardiovascular Research Institute (O.N.R., S.L.R.), Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois; and Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, Minnesota (S.J.G., D.D.T); and Department of Chemistry and Biochemistry, South Dakota State University, Brookings, South Dakota (S.H.I.).
Seth L RobiaDepartment of Cell and Molecular Physiology (S.H.I., O.N.R., S.L.R.), Cardiovascular Research Institute (O.N.R., S.L.R.), Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois; and Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, Minnesota (S.J.G., D.D.T); and Department of Chemistry and Biochemistry, South Dakota State University, Brookings, South Dakota (S.H.I.) srobia@luc.edu.

Funding

Structural Determinants of Calcium Pump RegulationR01HL092321 · NHLBI · LOYOLA UNIVERSITY CHICAGO · PI Seth L Robia · 2008 to 2026
$8.9M
Structural Dynamics of Muscle Calcium ATPase RegulationR01GM027906 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI THOMAS, DAVID D · 1985 to 2016
$8.6M
Structure Changes of Ion-motive ATPasesR01HL106189 · NHLBI · LOYOLA UNIVERSITY CHICAGO · PI ROBIA, SETH L · 2011 to 2014
$1.5M
NHLBI NIH HHS R01 HL092321NHLBI NIH HHS R01-HL092321NHLBI NIH HHS R01 HL106189NHLBI NIH HHS R01-HL106189NIGMS NIH HHS R01 GM027906NIGMS NIH HHS R01-GM27906
6 · The paper itself

Abstract

Multidrug resistance protein 1 (MRP1) actively transports a wide variety of drugs out of cells. To quantify MRP1 structural dynamics, we engineered a "two-color MRP1" construct by fusing green fluorescent protein (GFP) and TagRFP to MRP1 nucleotide-binding domains NBD1 and NBD2, respectively. The recombinant MRP1 protein expressed and trafficked normally to the plasma membrane. Two-color MRP1 transport activity was normal, as shown by vesicular transport of [(3)H]17β-estradiol-17-β-(D-glucuronide) and doxorubicin efflux in AAV-293 cells. We quantified fluorescence resonance energy transfer (FRET) from GFP to TagRFP as an index of NBD conformational changes. Our results show that ATP binding induces a large-amplitude conformational change that brings the NBDs into closer proximity. FRET was further increased by substrate in the presence of ATP but not by substrate alone. The data suggest that substrate binding is required to achieve a fully closed and compact structure. ATP analogs bind MRP1 with reduced apparent affinity, inducing a partially closed conformation. The results demonstrate the utility of the two-color MRP1 construct for investigating ATP-binding cassette transporter structural dynamics, and it holds great promise for high-throughput screening of chemical libraries for unknown activators, inhibitors, or transportable substrates of MRP1.

Indexed as

Adenosine TriphosphateATP Binding Cassette Transporter, Subfamily BBinding SitesCell MembraneDrug DiscoveryFluorescence Resonance Energy TransferGreen Fluorescent ProteinsHEK293 CellsHigh-Throughput Screening AssaysHumansModels, MolecularProtein Structure, SecondarySmall Molecule LibrariesABCB1 protein, humanAdenosine TriphosphateATP Binding Cassette Transporter, Subfamily BGreen Fluorescent ProteinsSmall Molecule Libraries

Identifiers

PMID25924616
PMCPMC4468642

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.