Evidence map›Paper›PMID 25923949›Full record

ArticleCellular microbiology2015

Atg8 is involved in endosomal and phagosomal acidification in the parasitic protist Entamoeba histolytica.

Karina Picazarri, Kumiko Nakada-Tsukui, Kumiko Tsuboi, Eri Miyamoto, Naoko Watanabe, Eiryo Kawakami, Tomoyoshi Nozaki

Open access · hybridAbstract read
In one paragraph

Article in Cellular microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Non-Vesicular Lipid Transport Machinery inInternational journal of molecular sciences · 2023
    Review
  5. Review
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  7. Article
  8. Review
  9. Review
  10. Article
  11. The Dichloromethane Fraction ofFrontiers in cellular and infection microbiology · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Changes in 30K protein synthesis during delayed degeneration of the silk gland by a caspase-dependent pathway in a Bombyx (silkworm) mutant.Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2016
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Karina PicazarriDepartment of Parasitology, National Institute of Infectious Diseases, Tokyo, Japan.
Kumiko Nakada-TsukuiDepartment of Parasitology, National Institute of Infectious Diseases, Tokyo, Japan.
Kumiko TsuboiDepartment of Parasitology, National Institute of Infectious Diseases, Tokyo, Japan.
Eri MiyamotoDepartment of Parasitology, National Institute of Infectious Diseases, Tokyo, Japan.
Naoko WatanabeDepartment of Biomolecular Science, Faculty of Science, Toho University, Chiba, Japan.
Eiryo KawakamiDepartment of Parasitology, National Institute of Infectious Diseases, Tokyo, Japan.
Tomoyoshi NozakiDepartment of Parasitology, National Institute of Infectious Diseases, Tokyo, Japan.
National Institutes of Health · USNational Institute of Infectious Diseases · JPRIKEN Center for Integrative Medical Sciences · JPToho University · JPUniversity of Tsukuba · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Autophagy is one of two major bulk protein degradation systems and is conserved throughout eukaryotes. The protozoan Entamoeba histolytica, which is a human intestinal parasite, possesses a restricted set of autophagy-related (Atg) proteins compared with other eukaryotes and thus represents a suitable model organism for studying the minimal essential components and ancestral functions of autophagy. E. histolytica possesses two conjugation systems: Atg8 and Atg5/12, although a gene encoding Atg12 is missing in the genome. Atg8 is considered to be the central and authentic marker of autophagosomes, but recent studies have demonstrated that Atg8 is not exclusively involved in autophagy per se, but other fundamental mechanisms of vesicular traffic. To investigate this question in E. histolytica, we studied on Atg8 during the proliferative stage. Atg8 was constitutively expressed in both laboratory-maintained and recently established clinical isolates and appeared to be lipid-modified in logarithmic growth phase, suggesting a role of Atg8 in non-stress and proliferative conditions. These findings are in contrast to those for Entamoeba invadens, in which autophagy is markedly induced during an early phase of differentiation from the trophozoite into the cyst. The repression of Atg8 gene expression in En. histolytica by antisense small RNA-mediated transcriptional gene silencing resulted in growth retardation, delayed endocytosis and reduced acidification of endosomes and phagosomes. Taken together, these results suggest that Atg8 and the Atg8 conjugation pathway have some roles in the biogenesis of endosomes and phagosomes in this primitive eukaryote.

Indexed as

Organelle BiogenesisEndosomesEntamoeba histolyticaGene Expression ProfilingPhagosomesProtozoan ProteinsProtozoan Proteins

Identifiers

PMID25923949
PMCPMC4744732
OpenAlexW1573255003

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.