Evidence map›Paper›PMID 25923708›Full record

ArticlePloS one2015

Blastocystis Isolates from Patients with Irritable Bowel Syndrome and from Asymptomatic Carriers Exhibit Similar Parasitological Loads, but Significantly Different Generation Times and Genetic Variability across Multiple Subtypes.

Gie-Bele Vargas-Sanchez, Mirza Romero-Valdovinos, Celedonio Ramirez-Guerrero, Ines Vargas-Hernandez, Maria Elena Ramirez-Miranda, Joel Martinez-Ocaña, Alicia Valadez, Cecilia Ximenez, Eduardo Lopez-Escamilla, Maria Elena Hernandez-Campos and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
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  3. Review
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  8. Infection & chemotherapy · 2021
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  9. Biology · 2021
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  16. Article
  17. Genetic Diversity and Distribution ofBioMed research international · 2018
    Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 1 country.

Gie-Bele Vargas-SanchezEscuela Superior de Medicina, Instituto Politecnico Nacional, Plan de San Luis y Diaz Mirón s/n, Casco de Santo Tomas, 11340, Mexico City, DF, Mexico.
Mirza Romero-ValdovinosHospital General "Dr. Manuel Gea Gonzalez", Calzada de Tlalpan 4800, Seccion XVI, 14080, Mexico City, DF, Mexico.
Celedonio Ramirez-GuerreroHospital Infantil de Mexico Federico Gomez, Dr. Marquez 162, Doctores, 06720, Mexico City, DF, Mexico.
Ines Vargas-HernandezCentro Especializado de Atención Primaria "Melchor-Ocampo, Bicentenario", Secretaria de Salud del Estado Mexico, Estado de Mexico, 54880, Mexico.
Maria Elena Ramirez-MirandaHospital General "Dr. Manuel Gea Gonzalez", Calzada de Tlalpan 4800, Seccion XVI, 14080, Mexico City, DF, Mexico.
Joel Martinez-OcañaHospital General "Dr. Manuel Gea Gonzalez", Calzada de Tlalpan 4800, Seccion XVI, 14080, Mexico City, DF, Mexico.
Alicia ValadezDepartamento de Medicina Experimental, Facultad de Medicina, Universidad Nacional Autonoma de Mexico, 04510, Mexico City, DF, Mexico.
Cecilia XimenezDepartamento de Medicina Experimental, Facultad de Medicina, Universidad Nacional Autonoma de Mexico, 04510, Mexico City, DF, Mexico.
Eduardo Lopez-EscamillaHospital General "Dr. Manuel Gea Gonzalez", Calzada de Tlalpan 4800, Seccion XVI, 14080, Mexico City, DF, Mexico.
Maria Elena Hernandez-CamposEscuela Superior de Medicina, Instituto Politecnico Nacional, Plan de San Luis y Diaz Mirón s/n, Casco de Santo Tomas, 11340, Mexico City, DF, Mexico.
Guiehdani VillalobosDepartamento de Ecologia Evolutiva, Instituto de Ecologia, Universidad Nacional Autonoma de Mexico, Avenida Universidad 3000, 04510, Mexico City, DF, Mexico.
Fernando Martinez-HernandezHospital General "Dr. Manuel Gea Gonzalez", Calzada de Tlalpan 4800, Seccion XVI, 14080, Mexico City, DF, Mexico.
Pablo MaravillaHospital General "Dr. Manuel Gea Gonzalez", Calzada de Tlalpan 4800, Seccion XVI, 14080, Mexico City, DF, Mexico.
Hospital General Dr. Manuel Gea Gonzalez · MXInstituto Politécnico Nacional · MXUniversidad Nacional Autónoma de México · MXHospital Infantil de México Federico Gómez · MXInstituto de Ecología · MXSecretaria de Salud · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Blastocystis spp is a common intestinal parasite of humans and animals that has been associated to the etiology of irritable bowel syndrome (IBS); however, some studies have not found this association. Furthermore, many biological features of Blastocystis are little known. The objective of present study was to assess the generation times of Blastocystis cultures, from IBS patients and from asymptomatic carriers. A total of 100 isolates were obtained from 50 IBS patients and from 50 asymptomatic carriers. Up to 50 mg of feces from each participant were cultured in Barret's and in Pavlova's media during 48 h. Initial and final parasitological load were measured by microscopy and by quantitative PCR. Amplicons were purified, sequenced and submitted to GenBank; sequences were analysed for genetic diversity and a Bayesian inference allowed identifying genetic subtypes (ST). Generation times for Blastocystis isolates in both media, based on microscopic measures and molecular assays, were calculated. The clinical symptoms of IBS patients and distribution of Blastocystis ST 1, 2 and 3 in both groups was comparable to previous reports. Interestingly, the group of cases showed scarce mean nucleotide diversity (π) as compared to the control group (0.011±0.016 and 0.118±0.177, respectively), whilst high gene flow and small genetic differentiation indexes between different ST were found. Besides, Tajima's D test showed negative values for ST1-ST3. No statistical differences regarding parasitological load between cases and controls in both media, as searched by microscopy and by qPCR, were detected except that parasites grew faster in Barret's than in Pavlova's medium. Interestingly, slow growth of isolates recovered from cases in comparison to those of controls was observed (p<0.05). We propose that generation times of Blastocystis might be easily affected by intestinal environmental changes due to IBS probably because virulent strains with slow growth may be selected, reducing their genetic variability.

Indexed as

Genetic VariationAdultBayes TheoremBlastocystisBlastocystis InfectionsCase-Control StudiesDNA, ProtozoanFecesFemaleHumansIrritable Bowel SyndromeMaleMiddle AgedPatientsPhylogenyReal-Time Polymerase Chain ReactionDNA, Protozoan

Identifiers

PMID25923708
PMCPMC4414267
OpenAlexW2078842892

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.