Evidence map›Paper›PMID 25923426›Full record

ArticleThe Pediatric infectious disease journal2015

Bacterial and Respiratory Viral Interactions in the Etiology of Acute Otitis Media in HIV-infected and HIV-uninfected South African Children.

Shabir A Madhi, Niresha Govender, Kishen Dayal, Raghavendra Devadiga, Melissa K Van Dyke, Nadia van Niekerk, Clare Louise Cutland, Peter V Adrian, Marta C Nunes

Registry-linked trialOpen access · hybridAbstract read
In one paragraph

Article in The Pediatric infectious disease journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT01031082 (Identification and Characterization of the Bacteria Causing Acute Otitis Media), which is not on this map. Cited by 13 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 2 pooled it
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01031082 completednot on this map

Identification and Characterization of the Bacteria Causing Acute Otitis Media (AOM) Episodes in HIV-positive and HIV-negative Children in South Africa

TypeobservationalSponsorGlaxoSmithKlineRan2009 to 2010Enrolled265ConditionsAcute Otitis MediaArmsMiddle ear fluid, nasopharyngeal aspirate and urine sample.
3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 2 syntheses or guidelines pooled it, 23 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  9. Panel 4: Report of the Microbiology Panel.Otolaryngology--head and neck surgery : official journal of American Academy of Otolaryngology-Head and Neck Surgery · 2017
    Review
  10. Article
  11. Observational
  12. Update on Human Rhinovirus and Coronavirus Infections.Seminars in respiratory and critical care medicine · 2016
    Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 4 countries.

Shabir A MadhiFrom the *Medical Research Council, Respiratory and Meningeal Pathogens Research Unit, †Department of Science and Technology National Research Foundation, Vaccine Preventable Diseases, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa; ‡National Institute for Communicable Diseases, A division of National Health Laboratory Services, Sandringham, Gauteng, South Africa; §Department of Ear, Nose and Throat Surgery, Chris Hani-Baragwanath Hospital, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa; ¶GlaxoSmithKline Pharmaceuticals Ltd., Bangalore, India; and ‖GlaxoSmithKline Vaccines, Wavre, Belgium.
Niresha Govender
Kishen Dayal
Raghavendra Devadiga
Melissa K Van Dyke
Nadia van Niekerk
Clare Louise Cutland
Peter V Adrian
Marta C Nunes
University of the Witwatersrand · ZAMedical Research Council · GBChris Hani Baragwanath Hospital · ZAGlaxoSmithKline (Belgium) · BEGlaxoSmithKline (India) · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBacteria and respiratory viruses are implicated in the pathogenesis of acute otitis media (AOM); however, data from low-middle income countries are sparse. We investigated the etiology of AOM in HIV-infected (HIV+), HIV-uninfected (HIV-) and HIV-exposed clinically asymptomatic for HIV-infection (HEU) South African children.

methodsChildren ≥3 months to <5 years of age with AOM were enrolled between May 2009 and April 2010 (NCT01031082). Middle ear fluid samples were cultured for bacteria; antibacterial susceptibility was done and serotyping undertaken for Streptococcus pneumoniae and Haemophilus influenzae. Nasopharyngeal aspirates were analyzed for respiratory viruses using immunofluorescence assay and polymerase chain reaction.

resultsOf 260 AOM episodes (HIV+:15; HIV-:182; HEU:63), bacteria were found in 54.6%, including Haemophilus influenzae (30.8%), 98.8% of which were nontypeable, and Streptococcus pneumoniae (20.4%), Staphylococcus aureus (15.8%), Moraxella catarrhalis (5.0%) and Streptococcus pyogenes (1.5%). Nonsusceptibility of Streptococcus pneumoniae to penicillin was 64.2%. Respiratory viruses were detected in 74.2% of cases. Human rhinovirus was most frequently detected (37.7%), followed by adenovirus (14.2%) and human bocavirus (11.5%) overall and irrespective of HIV status. Respiratory viruses were identified concurrently with S. pneumoniae, H. influenzae, M. catarrhalis (76.9-78.8%) and Staphylococcus aureus (63.4%) cultured from middle ear fluid, as well as in 72.0% of episodes negative for any bacteria.

conclusionThe study suggests that respiratory viruses and pathogenic bacteria play an important role in the development of AOM in children. A similar spectrum of pathogens was observed independently of HIV status. Vaccines targeting both nontypeable Haemophilus influenzae and S. pneumoniae may have a broad impact on AOM in South Africa.

Indexed as

BacteriaBacterial InfectionsChild, PreschoolExudates and TransudatesFemaleHIV InfectionsHumansInfantMaleMicrobial InteractionsNasopharynxOtitis MediaProspective StudiesSouth AfricaVirus DiseasesViruses

Identifiers

PMID25923426
PMCPMC4463031
OpenAlexW1990793093

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.