Evidence map›Paper›PMID 25922181›Full record

ArticleBioorganic & medicinal chemistry2015

Structure-based design, synthesis and biological testing of piperazine-linked bis-epipodophyllotoxin etoposide analogs.

Arun A Yadav, Gaik-Lean Chee, Xing Wu, Daywin Patel, Jack C Yalowich, Brian B Hasinoff

Abstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Piperazine skeleton in the structural modification of natural products: a review.Journal of enzyme inhibition and medicinal chemistry · 2021
    Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Arun A YadavCollege of Pharmacy, Apotex Centre, University of Manitoba, 750 McDermot Ave, Winnipeg, Manitoba R3E 0T5, Canada.
Gaik-Lean CheeCollege of Pharmacy, Apotex Centre, University of Manitoba, 750 McDermot Ave, Winnipeg, Manitoba R3E 0T5, Canada.
Xing WuCollege of Pharmacy, Apotex Centre, University of Manitoba, 750 McDermot Ave, Winnipeg, Manitoba R3E 0T5, Canada.
Daywin PatelCollege of Pharmacy, Apotex Centre, University of Manitoba, 750 McDermot Ave, Winnipeg, Manitoba R3E 0T5, Canada.
Jack C YalowichCollege of Pharmacy, The Ohio State University, 500 West 12th Avenue, Columbus, OH 43210, USA.
Brian B HasinoffCollege of Pharmacy, Apotex Centre, University of Manitoba, 750 McDermot Ave, Winnipeg, Manitoba R3E 0T5, Canada. Electronic address: B_Hasinoff@UManitoba.ca.
University of Manitoba · CAThe Ohio State University · US

Funding

Mechanisms and Prevention of Etoposide-Induced LeukemiaR01CA090787 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI YALOWICH, JACK C. · 2001 to 2011
$3.1M
Canadian Institutes of Health Research MOP13748NCI NIH HHS CA090787NCI NIH HHS R01 CA090787
6 · The paper itself

Abstract

Drugs that target DNA topoisomerase II, such as the epipodophyllotoxin etoposide, are a clinically important class of anticancer agents. A recently published X-ray structure of a ternary complex of etoposide, cleaved DNA and topoisomerase IIβ showed that the two intercalated etoposide molecules in the complex were separated by four DNA base pairs. Thus, using a structure-based design approach, a series of bis-epipodophyllotoxin etoposide analogs with piperazine-containing linkers was designed to simultaneously bind to these two sites. It was hypothesized that two-site binding would produce a more stable cleavage complex, and a more potent anticancer drug. The most potent bis-epipodophyllotoxin, which was 10-fold more growth inhibitory toward human erythroleukemic K562 cells than etoposide, contained a linker with eight methylene groups. All of the mono- and bis-epipodophyllotoxins, in a variety of assays, showed strong evidence that they targeted topoisomerase II. COMPARE analysis of NCI 60-cell GI50 endpoint data was also consistent with these compounds targeting topoisomerase II.

Indexed as

Antineoplastic AgentsBinding SitesCell ProliferationCell SurvivalDNA Topoisomerases, Type IIDrug DesignDrug Screening Assays, AntitumorEtoposideHumansInhibitory Concentration 50Intercalating AgentsK562 CellsMolecular Docking SimulationMolecular StructurePiperazinesPodophyllotoxinAntineoplastic AgentsDNA Topoisomerases, Type IIEtoposideIntercalating AgentsPiperazinesPodophyllotoxinTopoisomerase II InhibitorsAnticancerCOMPAREDNADockingEpipodophyllotoxinEtoposideK562 cellsMolecular modelingStructure-based designTopoisomerase II

Identifiers

PMID25922181
PMCPMC4461482
OpenAlexW2079411852

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.