Evidence map›Paper›PMID 25918132›Full record

ArticleToxicological sciences : an official journal of the Society of Toxicology2015

Genome-Wide Association Study Identifies Novel Loci Associated With Diisocyanate-Induced Occupational Asthma.

Berran Yucesoy, Kenneth M Kaufman, Zana L Lummus, Matthew T Weirauch, Ge Zhang, André Cartier, Louis-Philippe Boulet, Joaquin Sastre, Santiago Quirce, Susan M Tarlo and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Toxicological sciences : an official journal of the Society of Toxicology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 1 pooled it
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 1 synthesis or guideline pooled it, 53 citations in OpenAlex.

  1. Pooled it
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  5. Review
  6. Article
  7. Genetics of chronic respiratory disease.Nature reviews. Genetics · 2024
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  9. Regulation of MAPK Signaling Pathways by the Large HERC Ubiquitin Ligases.International journal of molecular sciences · 2023
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  13. Expression and functions of adenylyl cyclases in the CNS.Fluids and barriers of the CNS · 2022
    Review
  14. Article
  15. Article
  16. Article
  17. Pathogenic Single Nucleotide Polymorphisms on Autophagy-Related Genes.International journal of molecular sciences · 2020
    Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 3 countries.

Berran Yucesoy*Division of Immunology, Allergy and Rheumatology, University of Cincinnati College of Medicine, Cincinnati, Ohio.
Kenneth M KaufmanCincinnati Children's Hospital Medical Center, Center for Autoimmune Genomics and Etiology, and Cincinnati VA Medical Center.
Zana L Lummus*Division of Immunology, Allergy and Rheumatology, University of Cincinnati College of Medicine, Cincinnati, Ohio,Cincinnati Children's Hospital Medical Center, Center for Autoimmune Genomics and Etiology, and Cincinnati VA Medical Center,Cincinnati Children's Hospital Medical Center, Divisions of Biomedical Informatics and Developmental Biology,Cincinnati Children's Hospital Medical Center, Division of Human Genetics,Université de Montréal, Hôpital du Sacré-Coeur de Montréal, Montreal, Quebec, Canada,Université Laval, Hôpital Laval, Sainte-Foy, Québec, Canada,Department of Allergy, Fundación Jiménez Díaz and CIBER de Enfermedades Respiratorias CIBERES, Madrid, Spain,Department of Allergy, Hospital La Paz-IdiPAZ and CIBER de Enfermedades Respiratorias CIBERES, Madrid, Spain,University of Toronto, Toronto, Ontario, Canada and**Hospitals Vall D'Hebron, Barcelona and CIBER de Enfermedades Respiratorias CIBERES, Madrid, Spain.
Matthew T WeirauchCincinnati Children's Hospital Medical Center, Center for Autoimmune Genomics and Etiology, and Cincinnati VA Medical Center, Cincinnati Children's Hospital Medical Center, Divisions of Biomedical Informatics and Developmental Biology.
Ge ZhangCincinnati Children's Hospital Medical Center, Division of Human Genetics.
André CartierUniversité de Montréal, Hôpital du Sacré-Coeur de Montréal, Montreal, Quebec, Canada.
Louis-Philippe BouletUniversité Laval, Hôpital Laval, Sainte-Foy, Québec, Canada.
Joaquin SastreDepartment of Allergy, Fundación Jiménez Díaz and CIBER de Enfermedades Respiratorias CIBERES, Madrid, Spain.
Santiago QuirceDepartment of Allergy, Hospital La Paz-IdiPAZ and CIBER de Enfermedades Respiratorias CIBERES, Madrid, Spain.
Susan M TarloUniversity of Toronto, Toronto, Ontario, Canada and.
Maria-Jesus Cruz**Hospitals Vall D'Hebron, Barcelona and CIBER de Enfermedades Respiratorias CIBERES, Madrid, Spain.
Xavier Munoz**Hospitals Vall D'Hebron, Barcelona and CIBER de Enfermedades Respiratorias CIBERES, Madrid, Spain.
John B HarleyCincinnati Children's Hospital Medical Center, Center for Autoimmune Genomics and Etiology, and Cincinnati VA Medical Center.
David I Bernstein*Division of Immunology, Allergy and Rheumatology, University of Cincinnati College of Medicine, Cincinnati, Ohio, bernstdd@ucmail.uc.edu.
Centro de Investigación Biomédica en Red de Enfermedades Respiratorias · ESCincinnati Children's Hospital Medical Center · USCincinnati VA Medical Center · USUniversity of Cincinnati Medical Center · USUniversité de Montréal · CAUniversité Laval · CAUniversity of Toronto · CA

Funding

LCenter for Clinical and Translational Science and TrainingUL1TR001425 · NCATS · UNIVERSITY OF CINCINNATI · PI HEUBI, JAMES E., KISSELA, BRETT M · 2015 to 2024
$37.5M
HLA GENE COMPLEMENTATION IN PRIMARY SJOGREN'S AND LUPUSR01AI024717 · NIAID · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI KOTTYAN, LEAH CLAIRE, WEIRAUCH, MATTHEW TYSON · 1987 to 2025
$7.8M
Genetic Linkage in LupusR37AI024717 · NIAID · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI HARLEY, JOHN BARKER · 2005 to 2014
$4.2M
Genetic Suceptibility for Occupational AsthmaR01OH008795 · OH · UNIVERSITY OF CINCINNATI · PI BERNSTEIN, DAVID I. · 2006 to 2016
$2.9M
NCATS NIH HHS UL1 TR001425NIAID NIH HHS R01 AI024717NIAID NIH HHS R37 AI024717NIOSH CDC HHS R01 OH 008795NIOSH CDC HHS R01 OH008795
6 · The paper itself

Abstract

Diisocyanates, reactive chemicals used to produce polyurethane products, are the most common causes of occupational asthma. The aim of this study is to identify susceptibility gene variants that could contribute to the pathogenesis of diisocyanate asthma (DA) using a Genome-Wide Association Study (GWAS) approach. Genome-wide single nucleotide polymorphism (SNP) genotyping was performed in 74 diisocyanate-exposed workers with DA and 824 healthy controls using Omni-2.5 and Omni-5 SNP microarrays. We identified 11 SNPs that exceeded genome-wide significance; the strongest association was for the rs12913832 SNP located on chromosome 15, which has been mapped to the HERC2 gene (p = 6.94 × 10(-14)). Strong associations were also found for SNPs near the ODZ3 and CDH17 genes on chromosomes 4 and 8 (rs908084, p = 8.59 × 10(-9) and rs2514805, p = 1.22 × 10(-8), respectively). We also prioritized 38 SNPs with suggestive genome-wide significance (p < 1 × 10(-6)). Among them, 17 SNPs map to the PITPNC1, ACMSD, ZBTB16, ODZ3, and CDH17 gene loci. Functional genomics data indicate that 2 of the suggestive SNPs (rs2446823 and rs2446824) are located within putative binding sites for the CCAAT/Enhancer Binding Protein (CEBP) and Hepatocyte Nuclear Factor 4, Alpha transcription factors (TFs), respectively. This study identified SNPs mapping to the HERC2, CDH17, and ODZ3 genes as potential susceptibility loci for DA. Pathway analysis indicated that these genes are associated with antigen processing and presentation, and other immune pathways. Overlap of 2 suggestive SNPs with likely TF binding sites suggests possible roles in disruption of gene regulation. These results provide new insights into the genetic architecture of DA and serve as a basis for future functional and mechanistic studies.

Indexed as

Genome-Wide Association StudyAsthmaCyanatesHumansOccupational DiseasesCyanatesasthmadiisocyanategenetic polymorphismgenome-wide association study

Identifiers

PMID25918132
PMCPMC4560052
OpenAlexW2320332944

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.