Evidence map›Paper›PMID 25917908›Full record

ArticleJournal of bacteriology2015

Elucidation of the Photorhabdus temperata Genome and Generation of a Transposon Mutant Library To Identify Motility Mutants Altered in Pathogenesis.

Sheldon Hurst, Holli Rowedder, Brandye Michaels, Hannah Bullock, Ryan Jackobeck, Feseha Abebe-Akele, Umjia Durakovic, Jon Gately, Erik Janicki, Louis S Tisa

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Evaluation of the Antifungal Activities ofJournal of fungi (Basel, Switzerland) · 2022
    Article
  3. Permanent Draft Genome Sequence ofGenome announcements · 2017
    Article
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Sheldon HurstDepartment of Cellular, Molecular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA.
Holli RowedderDepartment of Cellular, Molecular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA.
Brandye MichaelsDepartment of Cellular, Molecular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA.
Hannah BullockDepartment of Cellular, Molecular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA.
Ryan JackobeckDepartment of Cellular, Molecular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA.
Feseha Abebe-AkeleDepartment of Cellular, Molecular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA.
Umjia DurakovicDepartment of Cellular, Molecular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA.
Jon GatelyDepartment of Cellular, Molecular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA.
Erik JanickiDepartment of Cellular, Molecular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA.
Louis S TisaDepartment of Cellular, Molecular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA louis.tisa@unh.edu.
University of New Hampshire · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

unlabelledThe entomopathogenic nematode Heterorhabditis bacteriophora forms a specific mutualistic association with its bacterial partner Photorhabdus temperata. The microbial symbiont is required for nematode growth and development, and symbiont recognition is strain specific. The aim of this study was to sequence the genome of P. temperata and identify genes that plays a role in the pathogenesis of the Photorhabdus-Heterorhabditis symbiosis. A draft genome sequence of P. temperata strain NC19 was generated. The 5.2-Mb genome was organized into 17 scaffolds and contained 4,808 coding sequences (CDS). A genetic approach was also pursued to identify mutants with altered motility. A bank of 10,000 P. temperata transposon mutants was generated and screened for altered motility patterns. Five classes of motility mutants were identified: (i) nonmotile mutants, (ii) mutants with defective or aberrant swimming motility, (iii) mutant swimmers that do not require NaCl or KCl, (iv) hyperswimmer mutants that swim at an accelerated rate, and (v) hyperswarmer mutants that are able to swarm on the surface of 1.25% agar. The transposon insertion sites for these mutants were identified and used to investigate other physiological properties, including insect pathogenesis. The motility-defective mutant P13-7 had an insertion in the RNase II gene and showed reduced virulence and production of extracellular factors. Genetic complementation of this mutant restored wild-type activity. These results demonstrate a role for RNA turnover in insect pathogenesis and other physiological functions. IMPORTANCE: The relationship between Photorhabdus and entomopathogenic nematode Heterorhabditis represents a well-known mutualistic system that has potential as a biological control agent. The elucidation of the genome of the bacterial partner and role that RNase II plays in its life cycle has provided a greater understanding of Photorhabdus as both an insect pathogen and a nematode symbiont.

Indexed as

Genome, BacterialAnimalsDNA, BacterialDNA Transposable ElementsGene Expression Regulation, BacterialGene LibraryHost-Parasite InteractionsMothsMovementMutationNematodaPhotorhabdusSymbiosisDNA, BacterialDNA Transposable Elements

Identifiers

PMID25917908
PMCPMC4455270
OpenAlexW2023942688

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.