Evidence map›Paper›PMID 25915653›Full record

ArticlePloS one2015

In Vivo Volatile Organic Compound Signatures of Mycobacterium avium subsp. paratuberculosis.

Andreas Bergmann, Phillip Trefz, Sina Fischer, Klaus Klepik, Gudrun Walter, Markus Steffens, Mario Ziller, Jochen K Schubert, Petra Reinhold, Heike Köhler and 1 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03787160 (Determining the Effect of Probiotics on Microbiome and Volatile Organic Compounds in Patients After Surgical Repair of Congenital Diaphragmatic Hernia), which is not on this map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03787160 nacompletednot on this mapstarted 2018, after this paper: background citation

Determining the Effect of Probiotics on Microbiome and Volatile Organic Compounds in Patients After Surgical Repair of Congenital Diaphragmatic Hernia

TypeinterventionalSponsorMedical University of GrazRan2018 to 2019Enrolled18ConditionsCongenital Diaphragmatic HerniaArmsinitial VOC, initial fecal microbiome, initial pulmonary microbiome, Maximum oxygen uptake, Functional residual capacity
3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 54 citations in OpenAlex.

  1. Detection ofSensors (Basel, Switzerland) · 2024
    Article
  2. Article
  3. Article
  4. Article
  5. Detection ofMicrobiology spectrum · 2023
    Article
  6. Probiotic OMNi-BiOTiCNutrients · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Non-Invasive Method to Detect Infection withSensors (Basel, Switzerland) · 2021
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Andreas BergmannDepartment of Anaesthesia and Intensive Care, University Medicine Rostock, Rostock, Germany.
Phillip TrefzDepartment of Anaesthesia and Intensive Care, University Medicine Rostock, Rostock, Germany.
Sina FischerInstitute of Molecular Pathogenesis, Friedrich-Loeffler-Institut (Federal Research Institute for Animal Health), Jena, Germany.
Klaus KlepikDepartment of Anaesthesia and Intensive Care, University Medicine Rostock, Rostock, Germany.
Gudrun WalterInstitute of Molecular Pathogenesis, Friedrich-Loeffler-Institut (Federal Research Institute for Animal Health), Jena, Germany.
Markus SteffensDepartment of Anaesthesia and Intensive Care, University Medicine Rostock, Rostock, Germany.
Mario ZillerFriedrich-Loeffler-Institut (Federal Research Institute for Animal Health), Greifswald, Germany, and Biomathematics Working Group,Insel Riems, Germany.
Jochen K SchubertDepartment of Anaesthesia and Intensive Care, University Medicine Rostock, Rostock, Germany.
Petra ReinholdInstitute of Molecular Pathogenesis, Friedrich-Loeffler-Institut (Federal Research Institute for Animal Health), Jena, Germany.
Heike KöhlerInstitute of Molecular Pathogenesis, Friedrich-Loeffler-Institut (Federal Research Institute for Animal Health), Jena, Germany.
Wolfram MiekischDepartment of Anaesthesia and Intensive Care, University Medicine Rostock, Rostock, Germany.
Friedrich-Loeffler-Institut · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mycobacterium avium ssp. paratuberculosis (MAP) is the causative agent of a chronic enteric disease of ruminants. Available diagnostic tests are complex and slow. In vitro, volatile organic compound (VOC) patterns emitted from MAP cultures mirrored bacterial growth and enabled distinction of different strains. This study was intended to determine VOCs in vivo in the controlled setting of an animal model. VOCs were pre-concentrated from breath and feces of 42 goats (16 controls and 26 MAP-inoculated animals) by means of needle trap microextraction (breath) and solid phase microextraction (feces) and analyzed by gas chromatography/ mass spectrometry. Analyses were performed 18, 29, 33, 41 and 48 weeks after inoculation. MAP-specific antibodies and MAP-specific interferon-γ-response were determined from blood. Identities of all marker-VOCs were confirmed through analysis of pure reference substances. Based on detection limits in the high pptV and linear ranges of two orders of magnitude more than 100 VOCs could be detected in breath and in headspace over feces. Twenty eight substances differed between inoculated and non-inoculated animals. Although patterns of most prominent substances such as furans, oxygenated substances and hydrocarbons changed in the course of infection, differences between inoculated and non-inoculated animals remained detectable at any time for 16 substances in feces and 3 VOCs in breath. Differences of VOC concentrations over feces reflected presence of MAP bacteria. Differences in VOC profiles from breath were linked to the host response in terms of interferon-γ-response. In a perspective in vivo analysis of VOCs may help to overcome limitations of established tests.

Indexed as

AnimalsBreath TestsFecesGoatsMycobacterium avium subsp. paratuberculosisParatuberculosisVolatile Organic CompoundsVolatile Organic Compounds

Identifiers

PMID25915653
PMCPMC4411140
OpenAlexW1994307499

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.