ArticleBreeding science2014
Rapid genotyping with DNA micro-arrays for high-density linkage mapping and QTL mapping in common buckwheat (Fagopyrum esculentum Moench).
Article in Breeding science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
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Who cites it
21 citing papers in PubMed, 51 citations in OpenAlex.
- Genome-wide identification and association analysis of informative SNPs of various nutri-nutraceutical traits in Buckwheat (Frontiers in plant science · 2025Article
- Genome-wide SNP discovery and genotyping delineates potential QTLs underlying major yield-attributing traits in buckwheat.The plant genome · 2024Article
- Genome sequencing reveals the genetic architecture of heterostyly and domestication history of common buckwheat.Nature plants · 2023Article
- Joint QTL Mapping and Transcriptome Sequencing Analysis Reveal Candidate Seed-Shattering-Related Genes in Common Buckwheat.International journal of molecular sciences · 2023Article
- Genetic basis of maturity time is independent from that of flowering time and contributes to ecotype differentiation in common buckwheat (Fagopyrum esculentum Moench).BMC plant biology · 2022Article
- Inflorescence Transcriptome Sequencing and Development of New EST-SSR Markers in Common Buckwheat (Plants (Basel, Switzerland) · 2022Article
- Beyond the Cereal Box: Breeding Buckwheat as a Strategic Crop for Human Nutrition.Plant foods for human nutrition (Dordrecht, Netherlands) · 2021Review
- Biotechnological Methods for Buckwheat Breeding.Plants (Basel, Switzerland) · 2021Review
- Mapping QTLs for 1000-grain weight and genes controlling hull type using SNP marker in Tartary buckwheat (Fagopyrum tataricum).BMC genomics · 2021Article
- Targeted amplicon sequencing + next-generation sequencing-based bulked segregant analysis identified genetic loci associated with preharvest sprouting tolerance in common buckwheat (Fagopyrum esculentum).BMC plant biology · 2021Article
- The genotype-dependent phenotypic landscape of quinoa in salt tolerance and key growth traits.DNA research : an international journal for rapid publication of reports on genes and genomes · 2020Article
- Genetic and genomic research for the development of an efficient breeding system in heterostylous self-incompatible common buckwheat (Fagopyrum esculentum).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020Review
- Genetic analysis of photoperiod sensitivity associated with difference in ecotype in common buckwheat.Breeding science · 2020Article
- Genomics-assisted breeding in minor and pseudo-cereals.Breeding science · 2020Article
- Important agronomic characteristics of yielding ability in common buckwheat; ecotype and ecological differentiation, preharvest sprouting resistance, shattering resistance, and lodging resistance.Breeding science · 2020Article
- History of the progressive development of genetic marker systems for common buckwheat.Breeding science · 2020Article
- Healthy and Resilient Cereals and Pseudo-Cereals for Marginal Agriculture: Molecular Advances for Improving Nutrient Bioavailability.Frontiers in genetics · 2020Review
- Revisiting the versatile buckwheat: reinvigorating genetic gains through integrated breeding and genomics approach.Planta · 2019Review
- Gene flow signature in the S-allele region of cultivated buckwheat.BMC plant biology · 2019Article
- Potential of Genomic Selection in Mass Selection Breeding of an Allogamous Crop: An Empirical Study to Increase Yield of Common Buckwheat.Frontiers in plant science · 2018Article
Corrections and comments
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Authors and funding
9 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
For genetic studies and genomics-assisted breeding, particularly of minor crops, a genotyping system that does not require a priori genomic information is preferable. Here, we demonstrated the potential of a novel array-based genotyping system for the rapid construction of high-density linkage map and quantitative trait loci (QTL) mapping. By using the system, we successfully constructed an accurate, high-density linkage map for common buckwheat (Fagopyrum esculentum Moench); the map was composed of 756 loci and included 8,884 markers. The number of linkage groups converged to eight, which is the basic number of chromosomes in common buckwheat. The sizes of the linkage groups of the P1 and P2 maps were 773.8 and 800.4 cM, respectively. The average interval between adjacent loci was 2.13 cM. The linkage map constructed here will be useful for the analysis of other common buckwheat populations. We also performed QTL mapping for main stem length and detected four QTL. It took 37 days to process 178 samples from DNA extraction to genotyping, indicating the system enables genotyping of genome-wide markers for a few hundred buckwheat plants before the plants mature. The novel system will be useful for genomics-assisted breeding in minor crops without a priori genomic information.
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