Evidence map›Paper›PMID 25914116›Full record

ArticleNature communications2015

Nanoparticles that deliver triplex-forming peptide nucleic acid molecules correct F508del CFTR in airway epithelium.

Nicole Ali McNeer, Kavitha Anandalingam, Rachel J Fields, Christina Caputo, Sascha Kopic, Anisha Gupta, Elias Quijano, Lee Polikoff, Yong Kong, Raman Bahal and 4 more

Abstract read
In one paragraph

Article in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. CRISPR for cystic fibrosis: Advances and insights from a systematic review.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Pooled it
  3. Review
  4. Article
  5. Article
  6. Article
  7. Systemic in utero gene editing as a treatment for cystic fibrosis.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Article
  9. Review
  10. Next generation triplex-forming PNAs for site-specific genome editing of the F508del CFTR mutation.Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Article

25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Nicole Ali McNeerDepartment of Biomedical Engineering, Yale University, New Haven, Connecticut 06520, USA.
Kavitha Anandalingam1] Department of Biomedical Engineering, Yale University, New Haven, Connecticut 06520, USA [2] Yale College, Department of Biomedical Engineering, New Haven, Connecticut 06520, USA.
Rachel J FieldsDepartment of Biomedical Engineering, Yale University, New Haven, Connecticut 06520, USA.
Christina CaputoDepartment of Pediatrics, Yale School of Medicine, New Haven, Connecticut 06510, USA.
Sascha KopicDepartment of Cellular and Molecular Physiology, Yale School of Medicine, New Haven, Connecticut 06510, USA.
Anisha GuptaDepartment of Therapeutic Radiology and Genetics, Yale School of Medicine, New Haven, Connecticut 06510, USA.
Elias QuijanoDepartment of Biomedical Engineering, Yale University, New Haven, Connecticut 06520, USA.
Lee PolikoffDepartment of Pediatrics, Yale School of Medicine, New Haven, Connecticut 06510, USA.
Yong Kong1] Yale Department of Molecular Biophysics and Biochemistry, New Haven, Connecticut 06520, USA [2] Yale University, Department of Bioinformatics, W.M Keck Foundation Biotechnology Resource Laboratory, New Haven, Connecticut 06511, USA.ORCID 0000000228815274
Raman BahalDepartment of Therapeutic Radiology and Genetics, Yale School of Medicine, New Haven, Connecticut 06510, USA.
John P Geibel1] Department of Cellular and Molecular Physiology, Yale School of Medicine, New Haven, Connecticut 06510, USA [2] Department of Surgery, Yale School of Medicine, New Haven, Connecticut 06510, USA.
Peter M GlazerDepartment of Therapeutic Radiology and Genetics, Yale School of Medicine, New Haven, Connecticut 06510, USA.
W Mark SaltzmanDepartment of Biomedical Engineering, Yale University, New Haven, Connecticut 06520, USA.
Marie E Egan1] Department of Pediatrics, Yale School of Medicine, New Haven, Connecticut 06510, USA [2] Department of Cellular and Molecular Physiology, Yale School of Medicine, New Haven, Connecticut 06510, USA.

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007205 · NIGMS · YALE UNIVERSITY · PI KAZMIERCZAK, BARBARA I · 1985 to 2019
$42.9M
Molecular and Cellular Transport in MucusR01EB000487 · NIBIB · YALE UNIVERSITY · PI IWASAKI, AKIKO, SALTZMAN, W. MARK · 2002 to 2019
$5.0M
Yale University Clinical and Translational Science Award ProgramTL1RR024137 · NCRR · YALE UNIVERSITY · PI SHERWIN, ROBERT S · 2006 to 2011
$3.2M
Targeted correction of the human CFTR geneR01HL125892 · NHLBI · YALE UNIVERSITY · PI EGAN, MARIE E, GLAZER, PETER M · 2015 to 2018
$2.2M
In vivo genomic editing of hematopoietic cells for HIV resistanceR01AI112443 · NIAID · YALE UNIVERSITY · PI GLAZER, PETER M, KUMAR, PRITI · 2014 to 2017
$2.1M
Targeted Correction of the Human Beta-globin GeneR01HL082655 · NHLBI · YALE UNIVERSITY · PI GLAZER, PETER M · 2007 to 2010
$1.6M
YALE PEDIATRIC BASIC SCIENCE TRAINING PROGRAMT32HD068201 · NICHD · YALE UNIVERSITY · PI EGAN, MARIE E · 2011 to 2015
$1.3M
Nanoparticle delivery of triplex-forming PNAs for thalassemia gene therapyF30HL110372 · NHLBI · YALE UNIVERSITY · PI MCNEER, NICOLE · 2011 to 2013
$136k
NCRR NIH HHS TL 1 RR024137NHLBI NIH HHS F30 HL110372NHLBI NIH HHS F30HL110372NHLBI NIH HHS R01 HL082655NHLBI NIH HHS R01HL082655NHLBI NIH HHS R01 HL125892NIAID NIH HHS R01 AI112443NIAID NIH HHS R01AI112443NIBIB NIH HHS R01 EB000487NIBIB NIH HHS R01EB000487NICHD NIH HHS T32 HD068201NICHD NIH HHS T32HD068201NIGMS NIH HHS T32 GM007205NIGMS NIH HHS T32GM07205
6 · The paper itself

Abstract

Cystic fibrosis (CF) is a lethal genetic disorder most commonly caused by the F508del mutation in the cystic fibrosis transmembrane conductance regulator (CFTR) gene. It is not readily amenable to gene therapy because of its systemic nature and challenges including in vivo gene delivery and transient gene expression. Here we use triplex-forming peptide nucleic acids and donor DNA in biodegradable polymer nanoparticles to correct F508del. We confirm modification with sequencing and a functional chloride efflux assay. In vitro correction of chloride efflux occurs in up to 25% of human cells. Deep-sequencing reveals negligible off-target effects in partially homologous sites. Intranasal delivery of nanoparticles in CF mice produces changes in the nasal epithelium potential difference assay, consistent with corrected CFTR function. Also, gene correction is detected in the nasal and lung tissue. This work represents facile genome engineering in vivo with oligonucleotides using a nanoparticle system to achieve clinically relevant levels of gene editing without off-target effects.

Indexed as

AnimalsCell LineChloridesCystic FibrosisCystic Fibrosis Transmembrane Conductance RegulatorDNA-Binding ProteinsGenetic TherapyHigh-Throughput Nucleotide SequencingHumansLactic AcidMice, Inbred C57BLNanoparticlesPeptide Nucleic AcidsPolyglycolic AcidPolylactic Acid-Polyglycolic Acid CopolymerPolymersChloridesCystic Fibrosis Transmembrane Conductance RegulatorDNA-Binding ProteinsLactic AcidMPG peptidePeptide Nucleic Acidspoly(beta-amino ester)Polyglycolic AcidPolylactic Acid-Polyglycolic Acid CopolymerPolymers

Identifiers

PMID25914116
PMCPMC4480796

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.