Evidence map›Paper›PMID 25913470›Full record

ArticleBiopolymers2015

A small molecule--DNA binding landscape.

Jonathan B Chaires

Abstract read
In one paragraph

Article in Biopolymers, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Uracil-Peptide-Pyrene Conjugates as CuChembiochem : a European journal of chemical biology · 2026
    Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Jonathan B ChairesDepartment of Medicine, James Graham Brown Cancer Center, University of Louisville, Louisville, KY 40202.

Funding

Targeting Nucleic Acids with an Integrated Vitural and Actual ScreenR01GM077422 · NIGMS · UNIVERSITY OF LOUISVILLE · PI CHAIRES, JONATHAN B., TRENT, JOHN O · 2007 to 2020
$3.7M
SPECIFICITY OF INTERCALATION REACTIONSR01CA035635 · NCI · UNIVERSITY OF MISSISSIPPI MEDICAL CENTER · PI CHAIRES, JONATHAN B. · 1985 to 2014
$2.0M
NCI NIH HHS CA35635NCI NIH HHS R01 CA035635NIGMS NIH HHS GM077422NIGMS NIH HHS R01 GM077422
6 · The paper itself

Abstract

This brief account traces the development of a "competition dialysis" method used to characterize the structural and sequence selectivity of DNA binding compounds. The method was inspired by a simple "differential dialysis" method pioneered by Don Crothers to explore base-selective intercalator binding. Results from compiled competition dialysis studies provide a small-molecule DNA binding landscape that shows a rich diversity of interactions and molecular recognition.

Indexed as

Binding SitesDNANucleic Acid ConformationDNAdialysisDNA bindingDonald Crothersmolecular recognition

Identifiers

PMID25913470
PMCPMC5705039

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.