Evidence map›Paper›PMID 25912046›Full record

ArticleGenome biology and evolution2015

The Magellania venosa Biomineralizing Proteome: A Window into Brachiopod Shell Evolution.

Daniel J Jackson, Karlheinz Mann, Vreni Häussermann, Markus B Schilhabel, Carsten Lüter, Erika Griesshaber, Wolfgang Schmahl, Gert Wörheide

Open access · goldAbstract read
In one paragraph

Article in Genome biology and evolution, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 72 citations in OpenAlex.

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  10. Optimized Sensory Units Integrated in the Chiton Shell.Marine biotechnology (New York, N.Y.) · 2022
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  11. Article
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  13. Article
  14. Mechanics unlocks the morphogenetic puzzle of interlocking bivalved shells.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  15. Article
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  19. Reflections on the evolution of the vertebrate tissue inhibitors of metalloproteinases.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 7 institutions in 2 countries.

Daniel J JacksonDepartment of Geobiology, Georg-August University of Göttingen, Germany.
Karlheinz MannDepartment of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Munich, Germany.
Vreni HäussermannEscuela de Ciencias del Mar, Valparaíso, Facultad de Recursos Naturales, Universidad Católica de Valparaíso, Chile.
Markus B SchilhabelInstitute of Clinical Molecular Biology, Christian-Albrechts-Universität Kiel, Germany.
Carsten LüterMuseum für Naturkunde, Leibniz-Institute for Evolution and Biodiversity Science, Berlin, Germany.
Erika GriesshaberDepartment of Earth- and Environmental Sciences & GeoBioCenter, Ludwig-Maximilians-Universität München, Germany.
Wolfgang SchmahlDepartment of Earth- and Environmental Sciences & GeoBioCenter, Ludwig-Maximilians-Universität München, Germany.
Gert WörheideDepartment of Earth- and Environmental Sciences & GeoBioCenter, Ludwig-Maximilians-Universität München, Germany Bavarian State Collections of Palaeontology & Geology, München, Germany woerheide@lmu.de.
Ludwig-Maximilians-Universität München · DEBavarian Natural History Collections · DEKiel University · DEMax Planck Institute of Biochemistry · DEMuseum für Naturkunde · DEPontificia Universidad Católica de Valparaíso · CLUniversity of Göttingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Brachiopods are a lineage of invertebrates well known for the breadth and depth of their fossil record. Although the quality of this fossil record attracts the attention of paleontologists, geochemists, and paleoclimatologists, modern day brachiopods are also of interest to evolutionary biologists due to their potential to address a variety of questions ranging from developmental biology to biomineralization. The brachiopod shell is a composite material primarily composed of either calcite or calcium phosphate in close association with proteins and polysaccharides which give these composite structures their material properties. The information content of these biomolecules, sequestered within the shell during its construction, has the potential to inform hypotheses focused on describing how brachiopod shell formation evolved. Here, using high throughput proteomic approaches and next generation sequencing, we have surveyed and characterized the first shell-proteome and shell-forming transcriptome of any brachiopod, the South American Magellania venosa (Rhynchonelliformea: Terebratulida). We find that the seven most abundant proteins present in the shell are unique to M. venosa, but that these proteins display biochemical features found in other metazoan biomineralization proteins. We can also detect some M. venosa proteins that display significant sequence similarity to other metazoan biomineralization proteins, suggesting that some elements of the brachiopod shell-forming proteome are deeply evolutionarily conserved. We also employed a variety of preparation methods to isolate shell proteins and find that in comparison to the shells of other spiralian invertebrates (such as mollusks) the shell ultrastructure of M. venosa may explain the effects these preparation strategies have on our results.

Indexed as

Biological EvolutionCalcification, PhysiologicAnimalsAnimal ShellsInvertebratesProteomeTranscriptomeProteomebiomineralizationBrachiopodaevolutionMagellaniaproteometranscriptome

Identifiers

PMID25912046
PMCPMC4453069
OpenAlexW2122512619

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.