Evidence map›Paper›PMID 25910874›Full record

ArticleJournal of applied genetics2015

Haplotypic diversity of porcine LEP and LEPR genes involved in growth and fatness regulation.

Dafne Pérez-Montarelo, M Carmen Rodríguez, Almudena Fernández, Rita Benítez, Fabián García, Luis Silió, Ana I Fernández

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of applied genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Dafne Pérez-MontareloMejora Genética Animal, Instituto Nacional de Tecnología Agraria y Alimentaria, Ctra. de la Coruña km. 7.5, 28040, Madrid, Spain.
M Carmen RodríguezMejora Genética Animal, Instituto Nacional de Tecnología Agraria y Alimentaria, Ctra. de la Coruña km. 7.5, 28040, Madrid, Spain.
Almudena FernándezMejora Genética Animal, Instituto Nacional de Tecnología Agraria y Alimentaria, Ctra. de la Coruña km. 7.5, 28040, Madrid, Spain.
Rita BenítezMejora Genética Animal, Instituto Nacional de Tecnología Agraria y Alimentaria, Ctra. de la Coruña km. 7.5, 28040, Madrid, Spain.
Fabián GarcíaMejora Genética Animal, Instituto Nacional de Tecnología Agraria y Alimentaria, Ctra. de la Coruña km. 7.5, 28040, Madrid, Spain.
Luis SilióMejora Genética Animal, Instituto Nacional de Tecnología Agraria y Alimentaria, Ctra. de la Coruña km. 7.5, 28040, Madrid, Spain.
Ana I FernándezMejora Genética Animal, Instituto Nacional de Tecnología Agraria y Alimentaria, Ctra. de la Coruña km. 7.5, 28040, Madrid, Spain. avila@inia.es.
Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The analysis of structural genetic variability in candidate genes can make it possible to analyse the selection footprint and deepen the understanding of the genetic basis of complex traits. The leptin (LEP) and its receptor (LEPR) porcine genes are involved in food intake and energy homeostasis, and polymorphisms associated to growth and fatness traits have been detected in both genes. The main objective of this study was to explore the genetic variability of the most polymorphic regions of both genes in a variety of pig populations and wild boars from diverse European and Asian origins. In total, 54 animals were included in the analyses, with a remarkable sampling of Spanish wild boars and Iberian pigs. The sequencing allowed the identification of 69 and 26 polymorphisms in LEP and LEPR genes, respectively. Neighbour-joining trees built for the 69 haplotypes identified in the LEP and the 24 haplotypes detected in the LEPR showed the known genetic divergence between European and Asian pig breeds. A high variability of the LEP was detected in the different analysed populations providing new data for the existence of two domestication centres in Asia. In comparison to the LEP gene, the LEPR showed a lower variability, especially in the Iberian breed that showed no variability. Moreover, results of the Hudson-Kreitman-Aguadé neutrality test support a possible selection event of the LEPR gene region in this breed, potentially related with its leptin resistance pattern and good adaptation to a traditional extensive production system with strong seasonal changes of feeding resources.

Indexed as

AdiposityAnimalsBreedingGenetics, PopulationHaplotypesLeptinPolymorphism, GeneticPromoter Regions, GeneticReceptors, LeptinSequence Analysis, DNASus scrofaSwineLeptinReceptors, LeptinHaplotypeIberian pigLEPLEPRmtDNASelection

Identifiers

PMID25910874
OpenAlexW2094288532

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.