Evidence map›Paper›PMID 25908866›Full record

ArticleJournal of cell science2015

Non-coding stem-bulge RNAs are required for cell proliferation and embryonic development in C. elegans.

Madzia P Kowalski, Howard A Baylis, Torsten Krude

Abstract read
In one paragraph

Article in Journal of cell science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Age-dependent upregulation of Y RNAs inmicroPublication biology · 2021
    Article
  5. Review
  6. Y RNAs: Biogenesis, Function and Implications for the Cardiovascular System.Advances in experimental medicine and biology · 2020
    Review
  7. Ro60 and Y RNAs: structure, functions, and roles in autoimmunity.Critical reviews in biochemistry and molecular biology · 2019
    Review
  8. Article
  9. Article
  10. SMORE: Synteny Modulator of Repetitive Elements.Life (Basel, Switzerland) · 2017
    Article
  11. Review
  12. Article
  13. Functional roles of non-coding Y RNAs.The international journal of biochemistry & cell biology · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Madzia P KowalskiDepartment of Zoology, University of Cambridge, Downing Street, Cambridge, CB2 3EJ, UK.
Howard A BaylisDepartment of Zoology, University of Cambridge, Downing Street, Cambridge, CB2 3EJ, UK.
Torsten KrudeDepartment of Zoology, University of Cambridge, Downing Street, Cambridge, CB2 3EJ, UK tk218@cam.ac.uk.

Funding

Biotechnology and Biological Sciences Research Council BB/F016581/1Biotechnology and Biological Sciences Research Council BB/K013378/1
6 · The paper itself

Abstract

Stem bulge RNAs (sbRNAs) are a family of small non-coding stem-loop RNAs present in Caenorhabditis elegans and other nematodes, the function of which is unknown. Here, we report the first functional characterisation of nematode sbRNAs. We demonstrate that sbRNAs from a range of nematode species are able to reconstitute the initiation of chromosomal DNA replication in the presence of replication proteins in vitro, and that conserved nucleotide sequence motifs are essential for this function. By functionally inactivating sbRNAs with antisense morpholino oligonucleotides, we show that sbRNAs are required for S phase progression, early embryonic development and the viability of C. elegans in vivo. Thus, we demonstrate a new and essential role for sbRNAs during the early development of C. elegans. sbRNAs show limited nucleotide sequence similarity to vertebrate Y RNAs, which are also essential for the initiation of DNA replication. Our results therefore establish that the essential function of small non-coding stem-loop RNAs during DNA replication extends beyond vertebrates.

Indexed as

AnimalsCaenorhabditis elegansCell ProliferationDNA ReplicationEmbryonic DevelopmentRNA, UntranslatedRNA, UntranslatedCell proliferationDNA replicationNon-coding RNA

Identifiers

PMID25908866
PMCPMC4450293

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.