Evidence map›Paper›PMID 25908611›Full record

ArticleToxicological sciences : an official journal of the Society of Toxicology2015

Mechanism-Based Classification of PAH Mixtures to Predict Carcinogenic Potential.

Susan C Tilton, Lisbeth K Siddens, Sharon K Krueger, Andrew J Larkin, Christiane V Löhr, David E Williams, William M Baird, Katrina M Waters

Open access · bronzeAbstract read
In one paragraph

Article in Toxicological sciences : an official journal of the Society of Toxicology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Influence of anthropogenic activities on metals, sugars and PAHs in PMEnvironmental science and pollution research international · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Classifying polycyclic aromatic hydrocarbons by carcinogenic potency using in vitro biosignatures.Toxicology in vitro : an international journal published in association with BIBRA · 2020
    Article
  8. Review
  9. Article
  10. Pharmacokinetics of [Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association · 2018
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Susan C Tilton*Superfund Research Center, Environmental and Molecular Toxicology Department, susan.tilton@oregonstate.edu.
Lisbeth K Siddens*Superfund Research Center, Environmental and Molecular Toxicology Department.
Sharon K Krueger*Superfund Research Center, Linus Pauling Institute.
Andrew J Larkin*Superfund Research Center, Environmental and Molecular Toxicology Department.
Christiane V LöhrCollege of Veterinary Medicine, Oregon State University, Corvallis, Oregon 97331, USA and.
David E Williams*Superfund Research Center, Environmental and Molecular Toxicology Department, Linus Pauling Institute.
William M Baird*Superfund Research Center, Environmental and Molecular Toxicology Department.
Katrina M Waters*Superfund Research Center, Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington 99352, USA.
Society of Environmental Toxicology and Chemistry · USLinus (Norway) · NOOregon State University · USPacific Northwest National Laboratory · US

Funding

Research Experience and Training Coordination CoreP42ES016465 · NIEHS · OREGON STATE UNIVERSITY · PI Susan C Tilton · 2009 to 2026
$52.5M
Transplacental Chemoprevention of Lung Tumors and LymphomasP01CA090890 · NCI · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI DASHWOOD, RODERICK H · 2003 to 2014
$14.2M
NCI NIH HHS P01 CA090890NCI NIH HHS P01 CA90890NIEHS NIH HHS P42 ES016465NIEHS NIH HHS P42 ES016465-S1
6 · The paper itself

Abstract

We have previously shown that relative potency factors and DNA adduct measurements are inadequate for predicting carcinogenicity of certain polycyclic aromatic hydrocarbons (PAHs) and PAH mixtures, particularly those that function through alternate pathways or exhibit greater promotional activity compared to benzo[a]pyrene (BaP). Therefore, we developed a pathway-based approach for classification of tumor outcome after dermal exposure to PAH/mixtures. FVB/N mice were exposed to dibenzo[def,p]chrysene (DBC), BaP, or environmental PAH mixtures (Mix 1-3) following a 2-stage initiation/promotion skin tumor protocol. Resulting tumor incidence could be categorized by carcinogenic potency as DBC >> BaP = Mix2 = Mix3 > Mix1 = Control, based on statistical significance. Gene expression profiles measured in skin of mice collected 12 h post-initiation were compared with tumor outcome for identification of short-term bioactivity profiles. A Bayesian integration model was utilized to identify biological pathways predictive of PAH carcinogenic potential during initiation. Integration of probability matrices from four enriched pathways (P < .05) for DNA damage, apoptosis, response to chemical stimulus, and interferon gamma signaling resulted in the highest classification accuracy with leave-one-out cross validation. This pathway-driven approach was successfully utilized to distinguish early regulatory events during initiation prognostic for tumor outcome and provides proof-of-concept for using short-term initiation studies to classify carcinogenic potential of environmental PAH mixtures. These data further provide a 'source-to-outcome' model that could be used to predict PAH interactions during tumorigenesis and provide an example of how mode-of-action-based risk assessment could be employed for environmental PAH mixtures.

Indexed as

AnimalsCarcinogensMicePolycyclic Aromatic HydrocarbonsCarcinogensPolycyclic Aromatic Hydrocarbonsmixturesmodelingpolycyclic aromatic hydrocarbonsskin cancertoxicogenomics

Identifiers

PMID25908611
PMCPMC4476464
OpenAlexW2111789320

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.