Evidence map›Paper›PMID 25907559›Full record

ArticleThe Journal of biological chemistry2015

Deletion of the Proposed Iron Chaperones IscA/SufA Results in Accumulation of a Red Intermediate Cysteine Desulfurase IscS in Escherichia coli.

Jing Yang, Guoqiang Tan, Ting Zhang, Robert H White, Jianxin Lu, Huangen Ding

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Genomic Characterization ofFrontiers in microbiology · 2022
    Article
  5. Article
  6. Expression of soluble native protein inBiotechnology reports (Amsterdam, Netherlands) · 2018
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Jing YangFrom the Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana 70803.
Guoqiang TanFrom the Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana 70803, the Laboratory of Molecular Medicine, Wenzhou Medical University, Wenzhou, Zhejiang 325035, China.
Ting Zhangthe Laboratory of Molecular Medicine, Wenzhou Medical University, Wenzhou, Zhejiang 325035, China.
Robert H Whitethe Department of Biochemistry, Virginia Polytechnic Institute and State University, Blacksburg, Virginia 24061, and.
Jianxin Luthe Laboratory of Molecular Medicine, Wenzhou Medical University, Wenzhou, Zhejiang 325035, China jxlu313@163.com.
Huangen DingFrom the Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana 70803, hding@lsu.edu.
Wenzhou Medical University · CNLouisiana State University · USVirginia Tech · US

Funding

Modification of human mitoNEET [2Fe-2S] cluster under nitric oxide stressR15GM109399 · NIGMS · LOUISIANA STATE UNIV A&M COL BATON ROUGE · PI DING, HUANGEN · 2014 to 2014
$336k
NIGMS NIH HHS GM109399NIGMS NIH HHS R15 GM109399
6 · The paper itself

Abstract

In Escherichia coli, sulfur in iron-sulfur clusters is primarily derived from L-cysteine via the cysteine desulfurase IscS. However, the iron donor for iron-sulfur cluster assembly remains elusive. Previous studies have shown that, among the iron-sulfur cluster assembly proteins in E. coli, IscA has a unique and strong iron-binding activity and that the iron-bound IscA can efficiently provide iron for iron-sulfur cluster assembly in proteins in vitro, indicating that IscA may act as an iron chaperone for iron-sulfur cluster biogenesis. Here we report that deletion of IscA and its paralog SufA in E. coli cells results in the accumulation of a red-colored cysteine desulfurase IscS under aerobic growth conditions. Depletion of intracellular iron using a membrane-permeable iron chelator, 2,2'-dipyridyl, also leads to the accumulation of red IscS in wild-type E. coli cells, suggesting that the deletion of IscA/SufA may be emulated by depletion of intracellular iron. Purified red IscS has an absorption peak at 528 nm in addition to the peak at 395 nm of pyridoxal 5'-phosphate. When red IscS is oxidized by hydrogen peroxide, the peak at 528 nm is shifted to 510 nm, which is similar to that of alanine-quinonoid intermediate in cysteine desulfurases. Indeed, red IscS can also be produced in vitro by incubating wild-type IscS with excess L-alanine and sulfide. The results led us to propose that deletion of IscA/SufA may disrupt the iron delivery for iron-sulfur cluster biogenesis, therefore impeding sulfur delivery by IscS, and result in the accumulation of red IscS in E. coli cells.

Indexed as

Gene DeletionAlanineCarbon-Sulfur LyasesCarrier ProteinsCysteineEscherichia coliEscherichia coli ProteinsIronIron-Sulfur ProteinsMolecular ChaperonesMutagenesis, Site-DirectedOxidation-ReductionPyridoxal PhosphateRecombinant ProteinsSulfidesAlanineCarbon-Sulfur LyasesCarrier ProteinsCysteinecysteine desulfuraseEscherichia coli ProteinsIronIron-Sulfur ProteinsIscA protein, E coliMolecular ChaperonesPyridoxal PhosphateRecombinant ProteinsSufA protein, E coliSulfidesenzyme mechanismiron metabolismiron-sulfur proteinmetalloenzymepyridoxal phosphatesulfur

Identifiers

PMID25907559
PMCPMC4447991
OpenAlexW2033317008

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.