Evidence map›Paper›PMID 25907378›Full record

Trial reportBritish journal of clinical pharmacology2015

In vivo assessment of the metabolic activity of CYP2D6 diplotypes and alleles.

Daniel L Hertz, Anna C Snavely, Howard L McLeod, Christine M Walko, Joseph G Ibrahim, Steven Anderson, Karen E Weck, Gustav Magrinat, Oludamilola Olajide, Susan Moore and 11 more

Registry-linked trialOpen access · bronzeAbstract readClinical Trial
In one paragraph

Trial report in British journal of clinical pharmacology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03582865 (Genetic Study of CYP2D6 Enzyme and Therapeutic Drug Monitoring of Tamoxifen in Premenopausal Women With Breast Cancer), which is not on this map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
8.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03582865 unknown statusnot on this mapstarted 2019, after this paper: background citation

Genetic Study of CYP2D6 Enzyme and Therapeutic Drug Monitoring of Tamoxifen in Premenopausal Women With Breast Cancer

TypeobservationalSponsorAssiut UniversityRan2019 to 2020Enrolled100ConditionsBreast CancerArmsTamoxifen 20 mg
3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Does ethnicity impact CYP2D6 genotype-phenotype relationships?Clinical and translational science · 2023
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. PharmVar GeneFocus: CYP2D6.Clinical pharmacology and therapeutics · 2020
    Review
  13. Non-Journal of clinical medicine · 2019
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Frontiers in pharmacology · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 12 institutions in 1 country.

Daniel L HertzUniversity of Michigan, Ann Arbor, MI48109-1065, USA.
Anna C SnavelyRTI International, Research Triangle Park, NC, 27709-2194, USA.
Howard L McLeodMoffitt Cancer Center, Tampa, FL, 33612, USA.
Christine M WalkoMoffitt Cancer Center, Tampa, FL, 33612, USA.
Joseph G IbrahimUniversity of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA.
Steven AndersonLaboratory Corporation of America, Burlington, NC, 27215, USA.
Karen E WeckUniversity of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA.
Gustav MagrinatMoses Cone Health Cancer Center, Greensboro, NC, 27401-1020, USA.
Oludamilola OlajideRex Hematology Oncology Associates, Raleigh, NC, 27607, USA.
Susan MooreRex Hematology Oncology Associates, Raleigh, NC, 27607, USA.
Rachel RaabBrody School of Medicine at East Carolina University, Greenville, NC, 27834, USA.
Daniel R CarrizosaLevine Cancer Institute, Charlotte, NC, 28204, USA.
Steven CorsoPalmetto Hematology Oncology, Spartanburg, SC, 29303, USA.
Garry SchwartzLevine Cancer Institute Concord, Concord, NC, 28025, USA.
Jeffrey M PeppercornDuke Cancer Institute, Durham, NC, 27705, USA.
James P EvansUniversity of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA.
David R JonesIndiana University, Bloomington, IN, 47405, USA.
Zeruesenay DestaIndiana University, Bloomington, IN, 47405, USA.
David A FlockhartIndiana University, Bloomington, IN, 47405, USA.
Lisa A CareyUniversity of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA.
William J IrvinUniversity of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA.
University of North Carolina at Chapel Hill · USIndiana University Bloomington · USHematology Oncology Associates · USLevine Cancer Institute · USMoffitt Cancer Center · USCone Health · USDuke Cancer InstituteEast Carolina University · USPalmetto Hematology Oncology · USRTI International · USUniversity of Michigan–Ann Arbor · USVirginia Cancer Institute · US

Funding

Tissue Procurement & PathologyP50CA058223 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CHARLES M PEROU · 1992 to 2026
$59.3M
TAMAXIFEN PHARMACOGENETICSU01GM061373 · NIGMS · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI FLOCKHART, DAVID ALASTAIR · 2000 to 2009
$17.0M
Indiana University Comprehensive Training in Clinical PharmacologyT32GM008425 · NIGMS · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI Zeruesenay Desta, Michael Thomas Eadon · 1992 to 2026
$7.7M
NCI NIH HHS CA58223NCI NIH HHS P50 CA058223NIGMS NIH HHS T32 GM008425NIGMS NIH HHS U-01GM061373
6 · The paper itself

Abstract

aimsA prospectively enrolled patient cohort was used to assess whether the prediction of CYP2D6 phenotype activity from genotype data could be improved by reclassification of diplotypes or alleles.

methodsThree hundred and fifty-five patients receiving tamoxifen 20 mg were genotyped for CYP2D6 and tamoxifen metabolite concentrations were measured. The endoxifen : N-desmethly-tamoxifen metabolic ratio, as a surrogate of CYP2D6 activity, was compared across four diplotypes (EM/IM, EM/PM, IM/IM, IM/PM) that are typically collapsed into an intermediate metabolizer (IM) phenotype. The relative metabolic activity of each allele type (UM, EM, IM, and PM) and each EM and IM allele was estimated for comparison with the activity scores typically assigned, 2, 1, 0.5 and 0, respectively.

resultsEach of the four IM diplotypes have distinct CYP2D6 activity from each other and from the EM and PM phenotype groups (each P < 0.05). Setting the activity of an EM allele at 1.0, the relative activities of a UM, IM and PM allele were 0.85, 0.67 and 0.52, respectively. The activity of the EM alleles were statistically different (P < 0.0001), with the CYP2D6*2 allele (scaled activity = 0.63) closer in activity to an IM than an EM allele. The activity of the IM alleles were also statistically different (P = 0.014).

conclusionThe current systems for translating CYP2D6 genotype into phenotype are not optimally calibrated, particularly in regards to IM diplotypes and the *2 allele. Additional research is needed to improve the prediction of CYP2D6 activity from genetic data for individualized dosing of CYP2D6 dependent drugs.

Indexed as

AllelesAdultAgedAged, 80 and overAntineoplastic Agents, HormonalCytochrome P-450 CYP2D6FemaleGenetic Association StudiesGenotypeHumansMiddle AgedPhenotypeTamoxifenYoung AdultAntineoplastic Agents, HormonalCytochrome P-450 CYP2D6Tamoxifenactivity scoreCYP2D6endoxifenN-desmethyl-tamoxifenpharmacogenetictamoxifen

Identifiers

PMID25907378
PMCPMC4631184
OpenAlexW1494910732

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.