Evidence map›Paper›PMID 25906395›Full record

ArticlePLoS genetics2015

The pif1 helicase, a negative regulator of telomerase, acts preferentially at long telomeres.

Jane A Phillips, Angela Chan, Katrin Paeschke, Virginia A Zakian

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Role and Regulation of Pif1 Family Helicases at the Replication Fork.International journal of molecular sciences · 2022
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Branched unwinding mechanism of the Pif1 family of DNA helicases.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  13. Review
  14. Article
  15. TheThe Journal of biological chemistry · 2018
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Jane A PhillipsPrinceton University, Department of Molecular Biology, Princeton, New Jersey, United States of America.
Angela ChanPrinceton University, Department of Molecular Biology, Princeton, New Jersey, United States of America.
Katrin PaeschkeUniversity of Würzburg, Department of Biochemistry, Biocenter, Würzburg, Germany.
Virginia A ZakianPrinceton University, Department of Molecular Biology, Princeton, New Jersey, United States of America.
Princeton University · USUniversity of Würzburg · DE

Funding

STRUCTURE &BEHAVIOR OF YEAST TELOMERESR01GM043265 · NIGMS · PRINCETON UNIVERSITY · PI ZAKIAN, VIRGINIA A. · 1990 to 2015
$7.6M
DNA REPLICATION AND CHROMOSOME STRUCTURE IN YEASTR37GM026938 · NIGMS · PRINCETON UNIVERSITY · PI ZAKIAN, VIRGINIA A. · 2000 to 2009
$5.0M
DNA REPLICATION AND CHROMOSOME STRUCUTRE IN YEASTR01GM026938 · NIGMS · PRINCETON UNIVERSITY · PI ZAKIAN, VIRGINIA A. · 1986 to 2016
$4.3M
NIGMS NIH HHS GM026938NIGMS NIH HHS GM043265NIGMS NIH HHS R01 GM026938NIGMS NIH HHS R01 GM043265NIGMS NIH HHS R37 GM026938
6 · The paper itself

Abstract

Telomerase, the enzyme that maintains telomeres, preferentially lengthens short telomeres. The S. cerevisiae Pif1 DNA helicase inhibits both telomerase-mediated telomere lengthening and de novo telomere addition at double strand breaks (DSB). Here, we report that the association of the telomerase subunits Est2 and Est1 at a DSB was increased in the absence of Pif1, as it is at telomeres, suggesting that Pif1 suppresses de novo telomere addition by removing telomerase from the break. To determine how the absence of Pif1 results in telomere lengthening, we used the single telomere extension assay (STEX), which monitors lengthening of individual telomeres in a single cell cycle. In the absence of Pif1, telomerase added significantly more telomeric DNA, an average of 72 nucleotides per telomere compared to the 45 nucleotides in wild type cells, and the fraction of telomeres lengthened increased almost four-fold. Using an inducible short telomere assay, Est2 and Est1 no longer bound preferentially to a short telomere in pif1 mutant cells while binding of Yku80, a telomere structural protein, was unaffected by the status of the PIF1 locus. Two experiments demonstrate that Pif1 binding is affected by telomere length: Pif1 (but not Yku80) -associated telomeres were 70 bps longer than bulk telomeres, and in the inducible short telomere assay, Pif1 bound better to wild type length telomeres than to short telomeres. Thus, preferential lengthening of short yeast telomeres is achieved in part by targeting the negative regulator Pif1 to long telomeres.

Indexed as

DNA Breaks, Double-StrandedDNA HelicasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTelomeraseTelomereTelomere-Binding ProteinsTelomere HomeostasisDNA HelicasesEST1 protein, S cerevisiaeEST2 protein, S cerevisiaePIF1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTelomeraseTelomere-Binding Proteins

Identifiers

PMID25906395
PMCPMC4408051
OpenAlexW1965087303

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.