Evidence map›Paper›PMID 25906080›Full record

ArticleAutophagy2015

Essential role for the ATG4B protease and autophagy in bleomycin-induced pulmonary fibrosis.

Sandra Cabrera, Mariana Maciel, Iliana Herrera, Teresa Nava, Fabián Vergara, Miguel Gaxiola, Carlos López-Otín, Moisés Selman, Annie Pardo

Open access · bronzeAbstract read
In one paragraph

Article in Autophagy, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 96 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
96citing papers in PubMed, 1 pooled it
9.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

96 citing papers in PubMed, 1 synthesis or guideline pooled it, 160 citations in OpenAlex.

  1. A Review of CXCL1 in Cardiac Fibrosis.Frontiers in cardiovascular medicine · 2021
    Pooled it
  2. Article
  3. Article
  4. Review
  5. Hallmarks of the ageing lung: 10 years later.The European respiratory journal · 2026
    Review
  6. Regulated Cell Death in Idiopathic Pulmonary Fibrosis.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Review
  7. Association of genetic variants in the autophagy gene ATG4B with asthma.medRxiv : the preprint server for health sciences · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Circular RNA-Encoded Proteins in Disease Pathogenesis.International journal of biological sciences · 2025
    Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

36 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Sandra Cabreraa Facultad de Ciencias; Universidad Nacional Autónoma de México ; Mexico DF , Mexico.
Mariana Maciel
Iliana Herrera
Teresa Nava
Fabián Vergara
Miguel Gaxiola
Carlos López-Otín
Moisés Selman
Annie Pardo
Universidad Nacional Autónoma de México · MXInstituto Nacional de Enfermedades Respiratorias · MXUniversidad de Oviedo · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Autophagy is a critical cellular homeostatic process that controls the turnover of damaged organelles and proteins. Impaired autophagic activity is involved in a number of diseases, including idiopathic pulmonary fibrosis suggesting that altered autophagy may contribute to fibrogenesis. However, the specific role of autophagy in lung fibrosis is still undefined. In this study, we show for the first time, how autophagy disruption contributes to bleomycin-induced lung fibrosis in vivo using an Atg4b-deficient mouse as a model. Atg4b-deficient mice displayed a significantly higher inflammatory response at 7 d after bleomycin treatment associated with increased neutrophilic infiltration and significant alterations in proinflammatory cytokines. Likewise, we found that Atg4b disruption resulted in augmented apoptosis affecting predominantly alveolar and bronchiolar epithelial cells. At 28 d post-bleomycin instillation Atg4b-deficient mice exhibited more extensive and severe fibrosis with increased collagen accumulation and deregulated extracellular matrix-related gene expression. Together, our findings indicate that the ATG4B protease and autophagy play a crucial role protecting epithelial cells against bleomycin-induced stress and apoptosis, and in the regulation of the inflammatory and fibrotic responses.

Indexed as

AnimalsApoptosisAutophagyAutophagy-Related ProteinsBleomycinCysteine EndopeptidasesCytokinesEpithelial CellsGene ExpressionHomeostasisIdiopathic Pulmonary FibrosisMice, KnockoutAtg4b protein, mouseAutophagy-Related ProteinsBleomycinCysteine EndopeptidasesCytokinesACTA2, actin, α 2, smooth muscle, aortaATG3, autophagy-related 3ATG4BATG4B, autophagy-related 4BATG5, autophagy-related 5ATG7, autophagy-related 7ATG9B, autophagy-related 9Bautophagin-1autophagyBAX, BCL2-associated X proteinCASP3, caspase 3, apoptosis-related cysteine peptidaseCAV1, caveolin 1, caveolae protein, 22kDaCCL3, chemokine (C-C motif) ligand 3CXCL1, chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity α)CXCR2, chemokine (C-X-C motif) receptor 2cysteine peptidaseDRAM2, DNA-damage regulated autophagy modulator 2epithelial cellGFP-LC3B, green fluorescent protein-LC3Bidiopathic pulmonary fibrosisIFNG, interferon, gammaIL12B, interleukin 12BIL13, interleukin 13IPF, idiopathic pulmonary fibrosislung fibrosisMAP1LC3B/LC3B, microtubule-associated protein 1 light chain 3 βRELA, v-rel reticuloendotheliosis viral oncogene homolog ASQSTM1, sequestosome 1TGFB1, transforming growth factor, β 1TGFBR2, transforming growth factor, β receptor II (70/80kDa)TNF, tumor necrosis factorTUBB4, tubulin, β 4, class IVWT, wild type

Identifiers

PMID25906080
PMCPMC4502665
OpenAlexW1784064412

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.